Detail information of GWHGAAEX002983/evm.TU.scaffold_129.34_evm.TU.scaffold_129.33


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|320104018|ref|YP_004179609.1|1.00E-34hypothetical protein Isop_2488 [Isosphaera pallida ATCC 43644]
nrgi|672145734|ref|XP_008796795.1|0PREDICTED: uncharacterized protein LOC103712139 isoform X2 [Phoenix dactylifera]
trEMBLtr|M0SRZ6|M0SRZ6_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr4P25350_001}
TAIRAT1G017700Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000132885972967109+
Transcript Sequence

Network for GWHGAAEX002983

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07287.10AtuA303595.30E-91
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms5.520
SRR2545915Juvenile tuber8.120
SRP108465SRR5643513five period of Gastrodia elata15.030
SRR5643514five period of Gastrodia elata15.860
SRR5643515five period of Gastrodia elata13.980
SRR5643524five period of Gastrodia elata14.190
SRR5643525five period of Gastrodia elata8.920
SRR5643528five period of Gastrodia elata9.070
SRR5643658five period of Gastrodia elata10.190
SRR5643659five period of Gastrodia elata15.800
SRR5643660five period of Gastrodia elata18.360
SRR5643661five period of Gastrodia elata16.520
SRR5643662five period of Gastrodia elata13.320
SRR5643663five period of Gastrodia elata13.830
SRR5643664five period of Gastrodia elata13.210
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_113.450
SRR6049655Rhizomagastrodiae_C368-T10_good_110.850
SRR6049656Rhizomagastrodiae_C368-T07_good_111.710
SRR6049657Rhizomagastrodiae_C368-T07_good_116.840
SRR6049658Rhizomagastrodiae_C368-T04_good_116.900
SRR6049659Rhizomagastrodiae_C368-T04_good_119.280
SRR6049660Rhizomagastrodiae_C368-T01_good_113.740
SRR6049661Rhizomagastrodiae_C368-T04_good_113.170
SRR6049662Rhizomagastrodiae_C368-T01_good_111.920
SRR6049663Rhizomagastrodiae_C368-T01_good_110.930
SRR6049664Rhizomagastrodiae_C368-T10_good_114.110
SRR6049665Rhizomagastrodiae_C368-T10_good_114.110
SRP279888GastroGastrodia elata tuber 19.32
JuvenJuvenile tuber28.91
Mother_GastroMother tuber of Gastrodia elata 17.25
Mother_JuvenMother tuber of Juvenile 23.35