Detail information of GWHGAAEX002987/evm.TU.scaffold_129.39


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743825620|ref|XP_010933070.1|1.21E-144PREDICTED: tetraspanin-10 isoform X1 [Elaeis guineensis]
Swissprottr|F4I214|TET10_ARATH5.00E-124Tetraspanin-10
trEMBLtr|B9GKK6|B9GKK6_POPTR1.00E-140Senescence-associated family protein {ECO:0000313|EMBL:EEE82854.2}
TAIRAT1G632601.00E-90tetraspanin10

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000001329965931032630+
Transcript Sequence

Network for GWHGAAEX002987

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00335.19Tetraspannin42488.20E-30
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0016021Cellular Componentintegral component of membrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms6.220
SRR2545915Juvenile tuber6.300
SRP108465SRR5643513five period of Gastrodia elata8.040
SRR5643514five period of Gastrodia elata8.200
SRR5643515five period of Gastrodia elata9.250
SRR5643524five period of Gastrodia elata8.910
SRR5643525five period of Gastrodia elata14.910
SRR5643528five period of Gastrodia elata8.190
SRR5643658five period of Gastrodia elata6.170
SRR5643659five period of Gastrodia elata7.210
SRR5643660five period of Gastrodia elata7.970
SRR5643661five period of Gastrodia elata8.760
SRR5643662five period of Gastrodia elata5.430
SRR5643663five period of Gastrodia elata7.740
SRR5643664five period of Gastrodia elata4.290
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_15.190
SRR6049655Rhizomagastrodiae_C368-T10_good_18.500
SRR6049656Rhizomagastrodiae_C368-T07_good_15.420
SRR6049657Rhizomagastrodiae_C368-T07_good_15.890
SRR6049658Rhizomagastrodiae_C368-T04_good_14.930
SRR6049659Rhizomagastrodiae_C368-T04_good_13.680
SRR6049660Rhizomagastrodiae_C368-T01_good_14.250
SRR6049661Rhizomagastrodiae_C368-T04_good_14.290
SRR6049662Rhizomagastrodiae_C368-T01_good_16.690
SRR6049663Rhizomagastrodiae_C368-T01_good_15.470
SRR6049664Rhizomagastrodiae_C368-T10_good_19.530
SRR6049665Rhizomagastrodiae_C368-T10_good_19.530
SRP279888GastroGastrodia elata tuber 5.69
JuvenJuvenile tuber3.77
Mother_GastroMother tuber of Gastrodia elata 10.96
Mother_JuvenMother tuber of Juvenile 4.66