Detail information of GWHGAAEX003002/evm.TU.scaffold_129.58


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|271961899|ref|YP_003336095.1|4.00E-10hypothetical protein [Streptosporangium roseum DSM 43021]
nrgi|672140903|ref|XP_008794267.1|0PREDICTED: uncharacterized protein LOC103710361 [Phoenix dactylifera]
trEMBLtr|M0SZY1|M0SZY1_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr5P19520_001}
TAIRAT4G234400Disease resistance protein (TIR-NBS class)

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000013215336781536683-
Transcript Sequence

Network for GWHGAAEX003002

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms27.360
SRR2545915Juvenile tuber33.570
SRP108465SRR5643513five period of Gastrodia elata23.840
SRR5643514five period of Gastrodia elata21.970
SRR5643515five period of Gastrodia elata29.770
SRR5643524five period of Gastrodia elata23.290
SRR5643525five period of Gastrodia elata16.520
SRR5643528five period of Gastrodia elata18.500
SRR5643658five period of Gastrodia elata19.290
SRR5643659five period of Gastrodia elata29.200
SRR5643660five period of Gastrodia elata25.040
SRR5643661five period of Gastrodia elata23.600
SRR5643662five period of Gastrodia elata22.790
SRR5643663five period of Gastrodia elata24.740
SRR5643664five period of Gastrodia elata19.690
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_123.690
SRR6049655Rhizomagastrodiae_C368-T10_good_112.270
SRR6049656Rhizomagastrodiae_C368-T07_good_122.710
SRR6049657Rhizomagastrodiae_C368-T07_good_120.550
SRR6049658Rhizomagastrodiae_C368-T04_good_118.320
SRR6049659Rhizomagastrodiae_C368-T04_good_117.870
SRR6049660Rhizomagastrodiae_C368-T01_good_117.940
SRR6049661Rhizomagastrodiae_C368-T04_good_121.030
SRR6049662Rhizomagastrodiae_C368-T01_good_118.610
SRR6049663Rhizomagastrodiae_C368-T01_good_119.270
SRR6049664Rhizomagastrodiae_C368-T10_good_119.700
SRR6049665Rhizomagastrodiae_C368-T10_good_119.700
SRP279888GastroGastrodia elata tuber 8.72
JuvenJuvenile tuber16.23
Mother_GastroMother tuber of Gastrodia elata 13.37
Mother_JuvenMother tuber of Juvenile 14.01