Detail information of GWHGAAEX003028/evm.TU.scaffold_129.86


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|662556522|gb|AIE56160.1|4.50E-73C-repeat binding factor 1 [Phalaenopsis aphrodite]
Swissprottr|Q8H273|DRE1E_ORYSJ3.00E-53Dehydration-responsive element-binding protein 1E
trEMBLtr|A0A075F7H8|A0A075F7H8_9ASPA2.00E-73C-repeat binding factor 1 {ECO:0000313|EMBL:AIE56160.1}
TAIRAT5G519905.00E-47C-repeat-binding factor 4

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000013223532092353757-
Transcript Sequence

Network for GWHGAAEX003028

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module13

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00847.19AP241911.00E-13
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyAP2/ERF-ERF

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms29.570
SRR2545915Juvenile tuber28.650
SRP108465SRR5643513five period of Gastrodia elata195.370
SRR5643514five period of Gastrodia elata92.450
SRR5643515five period of Gastrodia elata450.180
SRR5643524five period of Gastrodia elata43.780
SRR5643525five period of Gastrodia elata1098.190
SRR5643528five period of Gastrodia elata246.240
SRR5643658five period of Gastrodia elata302.990
SRR5643659five period of Gastrodia elata274.280
SRR5643660five period of Gastrodia elata61.650
SRR5643661five period of Gastrodia elata226.010
SRR5643662five period of Gastrodia elata328.460
SRR5643663five period of Gastrodia elata181.520
SRR5643664five period of Gastrodia elata1484.110
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1892.520
SRR6049655Rhizomagastrodiae_C368-T10_good_1665.130
SRR6049656Rhizomagastrodiae_C368-T07_good_1623.190
SRR6049657Rhizomagastrodiae_C368-T07_good_1751.100
SRR6049658Rhizomagastrodiae_C368-T04_good_1678.560
SRR6049659Rhizomagastrodiae_C368-T04_good_1721.460
SRR6049660Rhizomagastrodiae_C368-T01_good_11435.140
SRR6049661Rhizomagastrodiae_C368-T04_good_1657.120
SRR6049662Rhizomagastrodiae_C368-T01_good_1347.600
SRR6049663Rhizomagastrodiae_C368-T01_good_11143.970
SRR6049664Rhizomagastrodiae_C368-T10_good_1491.850
SRR6049665Rhizomagastrodiae_C368-T10_good_1491.850
SRP279888GastroGastrodia elata tuber 145.65
JuvenJuvenile tuber29.35
Mother_GastroMother tuber of Gastrodia elata 74.93
Mother_JuvenMother tuber of Juvenile 16.96