Detail information of GWHGAAEX003041/evm.TU.scaffold_13.5


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|568852774|ref|XP_006480046.1|3.87E-120PREDICTED: suppressor protein SRP40-like [Citrus sinensis]
trEMBLtr|A0A067H4X3|A0A067H4X3_CITSI3.00E-120Uncharacterized protein {ECO:0000313|EMBL:KDO87063.1}
TAIRAT3G626308.00E-85Protein of unknown function (DUF1645)

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000007138172139953-
Transcript Sequence

Network for GWHGAAEX003041

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07816.10DUF16451273611.00E-47
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms9.140
SRR2545915Juvenile tuber14.550
SRP108465SRR5643513five period of Gastrodia elata16.880
SRR5643514five period of Gastrodia elata12.570
SRR5643515five period of Gastrodia elata14.400
SRR5643524five period of Gastrodia elata11.180
SRR5643525five period of Gastrodia elata31.140
SRR5643528five period of Gastrodia elata12.640
SRR5643658five period of Gastrodia elata35.930
SRR5643659five period of Gastrodia elata25.540
SRR5643660five period of Gastrodia elata23.470
SRR5643661five period of Gastrodia elata31.200
SRR5643662five period of Gastrodia elata26.190
SRR5643663five period of Gastrodia elata23.510
SRR5643664five period of Gastrodia elata25.940
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_117.170
SRR6049655Rhizomagastrodiae_C368-T10_good_114.740
SRR6049656Rhizomagastrodiae_C368-T07_good_117.330
SRR6049657Rhizomagastrodiae_C368-T07_good_113.650
SRR6049658Rhizomagastrodiae_C368-T04_good_110.280
SRR6049659Rhizomagastrodiae_C368-T04_good_17.320
SRR6049660Rhizomagastrodiae_C368-T01_good_113.600
SRR6049661Rhizomagastrodiae_C368-T04_good_113.690
SRR6049662Rhizomagastrodiae_C368-T01_good_119.730
SRR6049663Rhizomagastrodiae_C368-T01_good_113.040
SRR6049664Rhizomagastrodiae_C368-T10_good_116.810
SRR6049665Rhizomagastrodiae_C368-T10_good_116.810
SRP279888GastroGastrodia elata tuber 6.31
JuvenJuvenile tuber7.79
Mother_GastroMother tuber of Gastrodia elata 16.06
Mother_JuvenMother tuber of Juvenile 8.96