Gene detail

Detail information of GWHGAAEX003045/evm.TU.scaffold_13.17

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|672125612\|ref\|XP_008786226.1\|	4.54E-27	PREDICTED: uncharacterized protein LOC103704638 [Phoenix dactylifera]
trEMBL	tr\|M0S2T7\|M0S2T7_MUSAM	9.00E-25	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr1P24800_001}
TAIR	AT5G38700	5.00E-16	Unannotated protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000007	529169	530730	-

Transcript Sequence
>GWHTAAEX003045 AGGAAATAACGAATCCATCGCCAGAACAATTCTTTCGAATTTCGCTTGGATTTCAAAGAGGGTTCTCGACGGGTTTTCGAAGAGGGATTTCGAACGAAGCCGAAGAAGCAGAAGTTTCTCCACGTCGGAGAATATGAGCTCTCCGCTGAATCGGGCGTAGTGACGAGTTACGCCCAGTTCGAGCGTAGCTAAATTGCCCTGTTTCTATATTTATTAAAGCAAAGTTAAATTACAATGTCATTTTACTTTCTACCATAATCTAAATTTATCCAAAGAAATTTTAATTTACATTGCTTTTATTTAAATCCTAACGGCCCATAGTAAATATAAGGGATGGGAATTTCACATATTGTATAATTTAGTTTAATAAATTTTATCACGGATGCTTAGGAGGGGAGTTGATTGAAAGATTTAATGCCGCGTCCTTTGGATGCAGTAGCTGTAAAGCCCGAAGCGCCCATATGAATTAGAACCTTCCCCACAATATATAAAGGTGCTGCTACCCCCGTAACCAGAAATCACTCATCCAATCTCCCTCTACAATGGAAAAGAGACGCGACAATTCGCGGTCTGGTCGCAGCAGCCGGCGCTGGCGGCTCCTCGGACTCGCCCTCCTGCCTTCATACCTCAAGAACCTCGGCCGAGCCCGTGCCGCCCAGCTCCGCCGCCGCGAGCGCGATTTCTCCCTTGACGACACCCCCGTTTTCCGCTTCAAGGTGCGCTTCCCGCGCTCGATACCGTGCATCACGCCGCCGCCCGTCGGCTTCGAAGACGACGACGAGGTCATCGCAGAGCGGCGCCAGGCGGCGGAGGAGCTCTTCGACGAAGACGGGCGAGATGACCGCAATGTGCCGGGCGGCGGGGATGCGGATGAGGGAGGGGACGAGATCGATGCGAGGGCGGAGAAGTTCATTGTCAAGTTTTATGAGCAGATGAAGCTGCAGAGGCAGATTTCGTATTTGGAGTACAACGAGATGCTTCTCAGAGGAATGAGCTGCTAGTTGGGTTGCTGTAATAGGAATCACTGTATTGAAAATAGAGAAATATTATAATGGCATCGAATTTCTTAAAAAAGTTTAATTTTTGGTTAAGTAATGCTCGATCGGTCCAATATGATTGGATCCTCTTAAGGTATGAGCTTTTGTTTTTGACCTCCAATGGAGGCAGAAGCATTCGTCGAAGGCCCAAAAGAGAAAATTTGAACAATAATAACACTACCTCTGTTTTTATTAACATTTCTGCTCCATCTAATGATCCTCATAATCCTCTCTCCCCAATTTTATCCACAACAACTATGTCATAAGATAGAGCATAAGTTCTCGGATTTTTCGATAAAGTTTTGTAATTTAGTTATTATTAATTTTTGAGGGTTAAAACTTGTTGAGAACTTTCAAGACCTGTGGAAATCTTATCGGGTCCAGAGCAAAACAGATTCGATTCGGTTGACCCGACCCGCCAAGAGCAGTGCGTCTTGCTCACTGGAGAGATGTAATCCTGTAACCCTAAATCATGCACTAAAACAAACGAACGTTATTATTCTTTCATTAGGATTTATGTTCAAT

Network for GWHGAAEX003045

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module13

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF05553.10	DUF761	114	147	5.20E-18

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	3.180
SRP064423	SRR2545915	Juvenile tuber	4.260
SRP108465	SRR5643513	five period of Gastrodia elata	2.560
	SRR5643514	five period of Gastrodia elata	2.730
	SRR5643515	five period of Gastrodia elata	7.750
	SRR5643524	five period of Gastrodia elata	2.120
	SRR5643525	five period of Gastrodia elata	11.570
	SRR5643528	five period of Gastrodia elata	2.000
	SRR5643658	five period of Gastrodia elata	5.240
	SRR5643659	five period of Gastrodia elata	6.110
	SRR5643660	five period of Gastrodia elata	2.330
	SRR5643661	five period of Gastrodia elata	5.170
	SRR5643662	five period of Gastrodia elata	9.490
	SRR5643663	five period of Gastrodia elata	14.960
	SRR5643664	five period of Gastrodia elata	92.260
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	9.260
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	3.410
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	7.800
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	9.210
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	3.060
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	1.700
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	5.300
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	4.030
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	2.210
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	6.470
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	5.280
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	5.280
SRP279888	Gastro	Gastrodia elata tuber	5.29
	Juven	Juvenile tuber	0.83
	Mother_Gastro	Mother tuber of Gastrodia elata	6.97
	Mother_Juven	Mother tuber of Juvenile	3.51