Detail information of GWHGAAEX003060/evm.TU.scaffold_13.39
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| nr | gi|586688378|ref|XP_006842420.1| | 9.37E-164 | hypothetical protein AMTR_s00077p00014810 [Amborella trichopoda] |
| Swissprot | tr|P22195|PER1_ARAHY | 3.00E-153 | Cationic peroxidase 1 (Precursor) |
| trEMBL | tr|W1PAP3|W1PAP3_AMBTC | 3.00E-164 | Uncharacterized protein {ECO:0000313|EMBL:ERN04095.1} |
| TAIR | AT5G05340 | 5.00E-138 | Peroxidase superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000007 | 1816872 | 1819438 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX003060
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module6 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00141.22 | peroxidase | 48 | 286 | 9.10E-79 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K00430 | E1.11.1.7 | Metabolic pathways | map01100 |
| Biosynthesis of secondary metabolites | map01110 | ||
| Phenylpropanoid biosynthesis | map00940 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006979 | Biological Process | response to oxidative stress |
| GO:0042744 | Biological Process | hydrogen peroxide catabolic process |
| GO:0055114 | Biological Process | oxidation-reduction process |
| GO:0004601 | Molecular Function | peroxidase activity |
| GO:0020037 | Molecular Function | heme binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 47.600 |
| SRR2545915 | Juvenile tuber | 23.580 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 211.640 |
| SRR5643514 | five period of Gastrodia elata | 163.820 | |
| SRR5643515 | five period of Gastrodia elata | 475.940 | |
| SRR5643524 | five period of Gastrodia elata | 329.620 | |
| SRR5643525 | five period of Gastrodia elata | 57.280 | |
| SRR5643528 | five period of Gastrodia elata | 114.800 | |
| SRR5643658 | five period of Gastrodia elata | 69.180 | |
| SRR5643659 | five period of Gastrodia elata | 256.670 | |
| SRR5643660 | five period of Gastrodia elata | 93.500 | |
| SRR5643661 | five period of Gastrodia elata | 170.850 | |
| SRR5643662 | five period of Gastrodia elata | 240.190 | |
| SRR5643663 | five period of Gastrodia elata | 157.690 | |
| SRR5643664 | five period of Gastrodia elata | 134.850 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 31.030 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 37.770 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 43.470 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 25.160 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 17.760 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 14.260 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 45.160 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 21.090 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 130.140 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 111.010 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 56.910 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 56.910 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 46.08 |
| Juven | Juvenile tuber | 20.01 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 117.59 | |
| Mother_Juven | Mother tuber of Juvenile | 161.50 |