Detail information of GWHGAAEX003061/evm.TU.scaffold_13.41
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| nr | gi|255559631|ref|XP_002520835.1| | 3.27E-158 | Peroxidase 52 precursor, putative [Ricinus communis] |
| Swissprot | tr|A7NY33|PER4_VITVI | 5.00E-151 | Peroxidase 4 {ECO:0000250|UniProtKB:Q42578} (Precursor) |
| trEMBL | tr|B9S4B6|B9S4B6_RICCO | 1.00E-158 | Peroxidase 52, putative {ECO:0000313|EMBL:EEF41544.1} |
| TAIR | AT5G05340 | 6.00E-147 | Peroxidase superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000007 | 1848446 | 1850497 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX003061
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module2 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00141.22 | peroxidase | 59 | 294 | 9.10E-81 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K00430 | E1.11.1.7 | Metabolic pathways | map01100 |
| Biosynthesis of secondary metabolites | map01110 | ||
| Phenylpropanoid biosynthesis | map00940 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0042744 | Biological Process | hydrogen peroxide catabolic process |
| GO:0006979 | Biological Process | response to oxidative stress |
| GO:0055114 | Biological Process | oxidation-reduction process |
| GO:0020037 | Molecular Function | heme binding |
| GO:0004601 | Molecular Function | peroxidase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 89.140 |
| SRR2545915 | Juvenile tuber | 553.770 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 983.030 |
| SRR5643514 | five period of Gastrodia elata | 751.300 | |
| SRR5643515 | five period of Gastrodia elata | 791.250 | |
| SRR5643524 | five period of Gastrodia elata | 668.200 | |
| SRR5643525 | five period of Gastrodia elata | 303.250 | |
| SRR5643528 | five period of Gastrodia elata | 158.700 | |
| SRR5643658 | five period of Gastrodia elata | 382.550 | |
| SRR5643659 | five period of Gastrodia elata | 1010.660 | |
| SRR5643660 | five period of Gastrodia elata | 717.970 | |
| SRR5643661 | five period of Gastrodia elata | 752.730 | |
| SRR5643662 | five period of Gastrodia elata | 255.130 | |
| SRR5643663 | five period of Gastrodia elata | 615.060 | |
| SRR5643664 | five period of Gastrodia elata | 210.660 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 396.900 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 480.790 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 798.170 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 360.520 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 234.280 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 160.640 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 682.290 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 250.500 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 1061.850 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 1038.340 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 876.950 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 876.950 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 126.37 |
| Juven | Juvenile tuber | 144.73 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 1.22 | |
| Mother_Juven | Mother tuber of Juvenile | 31.11 |