Detail information of GWHGAAEX003062/evm.TU.scaffold_13.42
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| nr | gi|356509058|ref|XP_003523269.1| | 4.71E-129 | PREDICTED: peroxidase 52-like isoform 1 [Glycine max] |
| Swissprot | tr|A7NY33|PER4_VITVI | 3.00E-123 | Peroxidase 4 {ECO:0000250|UniProtKB:Q42578} (Precursor) |
| trEMBL | tr|I1JY99|I1JY99_SOYBN | 2.00E-129 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G39860.1} |
| TAIR | AT5G05340 | 3.00E-118 | Peroxidase superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000007 | 1979524 | 1980441 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX003062
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module14 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00141.22 | peroxidase | 4 | 203 | 4.30E-63 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K00430 | E1.11.1.7 | Metabolic pathways | map01100 |
| Biosynthesis of secondary metabolites | map01110 | ||
| Phenylpropanoid biosynthesis | map00940 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0042744 | Biological Process | hydrogen peroxide catabolic process |
| GO:0006979 | Biological Process | response to oxidative stress |
| GO:0055114 | Biological Process | oxidation-reduction process |
| GO:0020037 | Molecular Function | heme binding |
| GO:0004601 | Molecular Function | peroxidase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 636.050 |
| SRR2545915 | Juvenile tuber | 711.040 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 1555.630 |
| SRR5643514 | five period of Gastrodia elata | 682.230 | |
| SRR5643515 | five period of Gastrodia elata | 1495.960 | |
| SRR5643524 | five period of Gastrodia elata | 1306.200 | |
| SRR5643525 | five period of Gastrodia elata | 453.980 | |
| SRR5643528 | five period of Gastrodia elata | 353.310 | |
| SRR5643658 | five period of Gastrodia elata | 344.420 | |
| SRR5643659 | five period of Gastrodia elata | 548.630 | |
| SRR5643660 | five period of Gastrodia elata | 484.830 | |
| SRR5643661 | five period of Gastrodia elata | 659.240 | |
| SRR5643662 | five period of Gastrodia elata | 251.780 | |
| SRR5643663 | five period of Gastrodia elata | 450.030 | |
| SRR5643664 | five period of Gastrodia elata | 224.610 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 250.090 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 385.570 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 253.190 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 221.150 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 248.170 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 341.680 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 371.630 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 330.380 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 621.950 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 479.130 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 450.160 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 450.160 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 663.53 |
| Juven | Juvenile tuber | 51.20 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 1,451.45 | |
| Mother_Juven | Mother tuber of Juvenile | 206.62 |