Gene detail

Detail information of GWHGAAEX003064/evm.TU.scaffold_13.44

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|672195043\|ref\|XP_008776450.1\|	6.86E-125	PREDICTED: WEB family protein At2g38370-like [Phoenix dactylifera]
Swissprot	tr\|F4ISY0\|Y2837_ARATH	1.00E-62	WEB family protein At2g38370
trEMBL	tr\|F6GXY4\|F6GXY4_VITVI	4.00E-105	Putative uncharacterized protein {ECO:0000313\|EMBL:CCB44785.1}
TAIR	AT2G38370	5.00E-62	Plant protein of unknown function (DUF827)

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000007	2115033	2138242	+

Transcript Sequence
>GWHTAAEX003064 AAAATAAAATATCTCTCATTTCCGTACAAACTTCCGAGGCTCCAATCAATGCCATGCCCTAGTCTGTTTTTTCCCAAGCTCTCAGTCACTCACACTGCTTCGAGCAAGGCTCCCGAGCGATCGTCACTTCGAATAAGGCTGAGGACAGGGAAGAGATGGAAAATGCCATTGTAGCAGCCCAAGCTTCGGTTTTGATGGAGAAAGTGGGAGCATGGCCGCCTGAAACCCTAGCTGTTGTTGATGGCTCAAAACCAGCGGGAATGGTGAGCATTTCTAGGGCTGAGGTGGACACCTCGTCTCCCTTCGTATCTGTCAAGGACGCTGTGGACCGATTCGGAGGCAGTGCACTGTGGGCGTCTCAGCTTAAGCGGTTTTTCAACTCTGAGAAACACCATTCAGTGGAGGATGATTTTCAGCTTAGGGATGTACAAAAGGAAACTGCTGAACTGGAGAAGGAACTTATTAAGAAAGAACAGGAAACTTGGGAGATTCTAAAGCATCTTGAAAGCACTAAAACAAATGTGGATAGCTTGAAAATGAGACTGTATGAAAAATTATTTGTAGTGAATGGATTTCCTGAAGCACTCTCTGAGGATTTAAAGCTTCATCCGGCGACTCGCATAGAATCCGAAGGGGAGATTTTGGGTGTTAACTCTGCCCATGCAGAGTCACCTAGATCGATTTTAGTTGGGCTTGGCCAAGCAAAGATGAATCTGAGCAGAAAAACACACGATCTGGCAGACATTCTAGCATCTATAGACTCAATAAACCATAAATTGAAGGAAGAGAAAGCTTCGATCGAGAAGACCCGTGGAAAGCTCTTTTTAAAAAGAAAGACCGTATCTTCCTTGGAGAATGATCTGCAGCAAATGACTTCAAAGCTGCAGTTGACCAAAGATGCAAAAGATAAATGTAATGAGGTGGAGGTTCCTGAAAGCGTACCTGAAGCGATCAAAGCTCTGATTTTTGAGAGAGAACATTTTAAAAAAACTGCAGAAACTGAGAAGTCTGAAGTACTGAGATTAACTTATGAGCTTGAGCATATAAAGATTAGCATAAAGGCTGCTGAAATCAGGTGCTCAGCAGCCAAGAAGATGGAAGAAGCAGCCAAAGCCATTGAGGCCGCCGCACTTGCTCAGTGTAAAGTTCTGATAAACAGCAGTAACTCGGCTTCAGATGTGGAGTGCCATTCGTCAGTGGTCCTTCCCATTGTAGAATATAGCATCTTGACTCATAAAATTCATGAAGCTGAAGAAAAGACAAGGAAGAGAATTGAATGTGCCATGCTGGAGGTATATAAAGCAAGCCAGTCTAAGCAACAGGTGGAAACAAAAATTGAGGAAGCTGCTGAAGCTGCAGAAAGTGTCAAAAAACTCCTGAAAGTAGCCATTAACCGTGCAGAGGCTGCAAACAGAGGAAAGCTAGCAGTTGAAGAAGCATTGAGGAAACGGAGATCCGAGCAAGGCCTAAAGAGATGCTGCAGCCTTCAGAACTCCCCGAAATTCAAGAACATATATCCGTGCTATCAAAGACAGGTCTCCTCTAGGATGCTCGATCTTAACGGACTTAATTTAGTGAATGATGATGATTTGATGGATGGGTTGAGGCATAATACATTGTCTATAGGAGAAATTCTGAGCAGGAAGTTGGTTGGGCCTGGAGATGATGATGATTATGACACAGCAAATCACAAGAGTTCTGATGAAAGAGCCAAAGTTTCTCTTGGCCAAATACTTAATAGAAGGCCTGAAGTTTTATCTCCTCGGTATGGCTGTGGATATGCTCGCAAGCAGCATCGCACAAAGAGGAAGAGATTTGGTATTGTGTTGTTCTCGCGCCTCTCAAGAAATGAAATATTGAAGCGCAAGAACAGGAAGCAGAATTCTGGTTCAGGATAAATATTGAATGGATGATGAAGTTGTCAGCTGGTATTTTTTCTTAGTTTCTCTTAGATAGAAATTAACTAGTTTTAGCCCTGTTCTAATGCTTGTGTTTCACACTTTTGTGTATAGTGTTGCAACTTTAAGATTCTACTTACAGATGGCTTTTAAAGCCAATGTGTTTGGACAAAAACTAAGAAATCATTCATCGGTTTCGCTTTCATGTATTAGTTTGATCGCGTATAGATGTTCTTTAAAGCTC

Network for GWHGAAEX003064

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module2

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF05701.10	WEMBL	42	130	9.50E-14
PF05701.10	WEMBL	181	437	7.30E-30

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	0.530
SRP064423	SRR2545915	Juvenile tuber	2.800
SRP108465	SRR5643513	five period of Gastrodia elata	1.860
	SRR5643514	five period of Gastrodia elata	2.990
	SRR5643515	five period of Gastrodia elata	2.210
	SRR5643524	five period of Gastrodia elata	2.610
	SRR5643525	five period of Gastrodia elata	0.660
	SRR5643528	five period of Gastrodia elata	0.260
	SRR5643658	five period of Gastrodia elata	0.470
	SRR5643659	five period of Gastrodia elata	0.960
	SRR5643660	five period of Gastrodia elata	0.360
	SRR5643661	five period of Gastrodia elata	0.660
	SRR5643662	five period of Gastrodia elata	0.290
	SRR5643663	five period of Gastrodia elata	0.150
	SRR5643664	five period of Gastrodia elata	0.150
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	0.770
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	1.530
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	1.070
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	1.220
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	0.720
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	0.250
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	0.790
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	2.170
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	3.100
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	1.340
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	1.910
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	1.910
SRP279888	Gastro	Gastrodia elata tuber	0.71
	Juven	Juvenile tuber	1.40
	Mother_Gastro	Mother tuber of Gastrodia elata	0.20
	Mother_Juven	Mother tuber of Juvenile	0.61