Gene detail

Detail information of GWHGAAEX003065/evm.TU.scaffold_13.47

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|218781433\|ref\|YP_002432751.1\|	2.00E-36	serine/threonine protein kinase [Desulfatibacillum alkenivorans AK-01]
KOG	KOG0583	0	Serine/threonine protein kinase
nr	gi\|731911625\|gb\|AIZ68214.1\|	0	CBL-interacting protein kinase 18-like protein [Ornithogalum saundersiae]
Swissprot	tr\|Q5W736\|CIPKI_ORYSJ	0	CBL-interacting protein kinase 18
trEMBL	tr\|A5BJJ8\|A5BJJ8_VITVI	0	CBL-interacting protein kinase 07 {ECO:0000313\|EMBL:ACQ83523.1}
TAIR	AT5G58380	0	SOS3-interacting protein 1

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000007	2263401	2266262	-

Transcript Sequence
>GWHTAAEX003065 GTTTGTTTCGCCGAACCGGCCGGCCGGACAGCTAAGGGGAAACCGAACCTGTTTACGAGAGCTGTTAATTTAACGAACGGAGAACGAAGGGCCTGAAGAAGGCTGGTGGGGGAATCTTAAAAGCATCGAGGAGAATAAAAAGTTGGAGAAGCTAGGGTTTGTTACCTCCATTGTTTCCTATAAAATGACTACTATTCTTGCTCCCTTCATCACAATCTACCAAGTTTTCTCGTATTCTTTTTTCTCAACTTATCTCAGCGATACATAAATCTTCAGTGGAAGGAAGAGATTTGCATAGAACAGGAAAAAGAAAGTGAAAACTGGGAAAAACGATTCAAGGAATGCTGAAAAATGTGCTTCCATTCAAAGGTATTCATGTCTGAGTTGAATAAAGCAGCCATCCCCAATCAGCTTCCACCCCTCATCCTCAACGAGATTGGAGGAAAAGCAATTATCCAGCAAAAGTTCCACTCAAGGATGAACACTGAAACCCGAAATTCAAGAAACCCTGTTGTTCTAGGGTACGACATTGGCGACGATGGTTGAATTCTTTTTAAGTCTTTAGTCCTCCTGCACTTGTAGAAATTTAATATAAAAGGTGAGAACAGTTTTGCAAAAGAACAGAAGGGGAAAAAATGGGATCAGAAAATAAGGGGTGTGTTATAATTCAAAGGTACGAATTAGGGAGGTTATTAGGGCAAGGGACATTTGCCAAGGTTTACCATGCAAGGAATATCACAACTTCGCAGGGTGTTGCCATAAAGATAATTGACAAGGAAAAAGTTTTCAAGGTCGGGCTCATTGATCAGATCAAGCGAGAGGTCTCCGTCATGAAGCTAGTGAGACACCCAAACATTGTGCAGCTTTACGAGGTCATGGCAAGCAAATCAAAGATCTACTTTGTTCTTGAGTATGTTAAAGGTGGAGAACTTTTTAACAAGGTTTTGAAAGGTAGAATCAAGGAAGATGTCGCCCGGAAGTATTTTCAACAGCTGATTAGTGCCGTCGACTTCTGCCATAGCCGAGGGGTTTATCATCGTGATCTCAAACCGGAGAACCTTCTTTTGGACGAAAATGGGAATCTGAAGGTCTCGGATTTCGGGCTGAGCGCTCTTCCTGAGTCTAAGAAGCAGGACGGATTACTCCACACTACATGCGGAACTCCAGCATATGTTGCTCCCGAGGTGATCAGCAGGAAAGGATACGATGGCGCTAAAGCGGACATCTGGTCGTGTGGGGTGATTTTATTCGTTCTCTTGGCGGGTTATTTGCCGTTCCAAGATCCAAACCTTATGGAGATGTACCGAAAGATTGGAAGAGCTGAATTTAAGTACCCAAATTGGTTCCCGTCCGATGTCAAAAGGCTTATAACTAAGATTCTAGACCCTAATCCTGCGAACCGGATCTCAATTTCGAAAATCAAAGAGAGTTCGTGGTTTCGAAAGGGTCTCATTTCCTCCAATCAGCTGAAAAGCAAAGTAGATGCCAAAGAATTTCGTCCACCAGAAGTTGATGCAGCTTTTAAACCTTCTCAGAGCAATGCCCCGGAAGAAAAGCAGGAGACAGGGAATCAGGCATTGGTGAATCCTGTGAACTTGAACGCTTTTGACATCATTTCGTTTTCGTCCGGCTTTGATCTCTCGGGTCTGTTTGGCGAGGCCAACCGCGAAAGGGAAGCGCGATTCACATCCTCTAAGCCAGCTTCGGCCATTATATCGAAACTTGAGGAGATGGCCAGCCGGTTAAGGCTGAAGGTGAAGAAGAAGGATGGGCGCATCTTGAAGATGGAAGGATTGAAAGAAGGTCGGAAGGGTGTTTTGGCCATTGATGCTGAGATTTTTGAGGTGACTCCTTCGTTCCATATGGTGGAGATAAGTAAGACTAATGGGGATACACTGGAGTATCAAAAGCTATGGAAACAGGATATGAGGCCAGCTCTTAAGGATATTGTGTGGGCATGGCATGGGAATGCTCCTTCTTCTTAATAAAAGCTGCAGCGTATTGCAAGGGTGGATTCAGTATAATAAAATTTTATTTCATGAACTAAAAATTTCTTCCGTTTTATAAAATTGTGGTTCCTTAATGTATAACTGTTTACTAGAATTTTTTTAATTTTTTTCTTAGATTGTCCAAGTTTGTAGCCATGCGTTCTTTCAGCATTGTAGAGTTGTTCACGGTCCAGTAATGAATCTGTTTATTTTATATGTACTCCCCTCACCCTTTTTT

Network for GWHGAAEX003065

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00069.24	Pkinase	14	268	2.00E-75
PF03822.13	NAF	318	376	8.60E-25

Protein Sequence

Gene family

Gene family	subfamily
Protein Kinases Family	CAMK_CAMKL-CHK1

KEGG pathway

KO	Enzyme	pathway	mapID
K07198	PRKAA, AMPK	Apelin signaling pathway	map04371
		FoxO signaling pathway	map04068
		PI3K-Akt signaling pathway	map04151
		AMPK signaling pathway	map04152
		mTOR signaling pathway	map04150
		Autophagy - animal	map04140
		Tight junction	map04530
		Insulin signaling pathway	map04910
		Glucagon signaling pathway	map04922
		Adipocytokine signaling pathway	map04920
		Oxytocin signaling pathway	map04921
		Axon regeneration	map04361
		Longevity regulating pathway	map04211
		Longevity regulating pathway - multiple species	map04213
		Circadian rhythm	map04710
		Thermogenesis	map04714

Gene Ontology

GO term	Ontology	Name
GO:0006468	Biological Process	protein phosphorylation
GO:0007165	Biological Process	signal transduction
GO:0004672	Molecular Function	protein kinase activity
GO:0005524	Molecular Function	ATP binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	31.800
SRP064423	SRR2545915	Juvenile tuber	26.950
SRP108465	SRR5643513	five period of Gastrodia elata	31.520
	SRR5643514	five period of Gastrodia elata	28.300
	SRR5643515	five period of Gastrodia elata	29.200
	SRR5643524	five period of Gastrodia elata	23.380
	SRR5643525	five period of Gastrodia elata	47.650
	SRR5643528	five period of Gastrodia elata	36.540
	SRR5643658	five period of Gastrodia elata	45.560
	SRR5643659	five period of Gastrodia elata	33.920
	SRR5643660	five period of Gastrodia elata	32.860
	SRR5643661	five period of Gastrodia elata	33.150
	SRR5643662	five period of Gastrodia elata	31.540
	SRR5643663	five period of Gastrodia elata	32.480
	SRR5643664	five period of Gastrodia elata	33.400
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	41.130
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	42.940
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	52.240
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	39.980
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	38.780
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	35.400
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	60.150
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	41.870
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	47.970
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	68.310
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	48.570
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	48.570
SRP279888	Gastro	Gastrodia elata tuber	27.29
	Juven	Juvenile tuber	19.33
	Mother_Gastro	Mother tuber of Gastrodia elata	34.19
	Mother_Juven	Mother tuber of Juvenile	17.49