Detail information of GWHGAAEX003066/evm.TU.scaffold_13.48


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|189218080|ref|YP_001938722.1|2.00E-24phosphatase/phosphohexomutase HAD superfamily [Methylacidiphilum infernorum V4]
KOGKOG29147.00E-95Predicted haloacid-halidohydrolase and related hydrolases
nrgi|700257193|gb|AIU50208.1|0haloacid dehalogenase-like hydrolase superfamily protein, partial [Iris japonica]
trEMBLtr|A0A097PQB4|A0A097PQB4_9ASPA0Haloacid dehalogenase-like hydrolase superfamily protein {ECO:0000313|EMBL:AIU50208.1} (Fragment)
TAIRAT3G109707.00E-95Haloacid dehalogenase-like hydrolase (HAD) superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000000723331832375983-
Transcript Sequence

Network for GWHGAAEX003066

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13419.5HAD_21202986.40E-17
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms41.650
SRR2545915Juvenile tuber49.500
SRP108465SRR5643513five period of Gastrodia elata37.060
SRR5643514five period of Gastrodia elata33.600
SRR5643515five period of Gastrodia elata31.450
SRR5643524five period of Gastrodia elata34.370
SRR5643525five period of Gastrodia elata28.120
SRR5643528five period of Gastrodia elata29.640
SRR5643658five period of Gastrodia elata30.890
SRR5643659five period of Gastrodia elata32.840
SRR5643660five period of Gastrodia elata41.470
SRR5643661five period of Gastrodia elata37.680
SRR5643662five period of Gastrodia elata36.400
SRR5643663five period of Gastrodia elata46.590
SRR5643664five period of Gastrodia elata46.420
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_139.280
SRR6049655Rhizomagastrodiae_C368-T10_good_136.880
SRR6049656Rhizomagastrodiae_C368-T07_good_141.190
SRR6049657Rhizomagastrodiae_C368-T07_good_141.250
SRR6049658Rhizomagastrodiae_C368-T04_good_141.620
SRR6049659Rhizomagastrodiae_C368-T04_good_142.540
SRR6049660Rhizomagastrodiae_C368-T01_good_136.310
SRR6049661Rhizomagastrodiae_C368-T04_good_138.760
SRR6049662Rhizomagastrodiae_C368-T01_good_133.760
SRR6049663Rhizomagastrodiae_C368-T01_good_132.480
SRR6049664Rhizomagastrodiae_C368-T10_good_135.540
SRR6049665Rhizomagastrodiae_C368-T10_good_135.540
SRP279888GastroGastrodia elata tuber 58.33
JuvenJuvenile tuber46.51
Mother_GastroMother tuber of Gastrodia elata 29.43
Mother_JuvenMother tuber of Juvenile 34.22