Gene detail

Detail information of GWHGAAEX003070/evm.TU.scaffold_13.55

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|386712715\|ref\|YP_006179037.1\|	7.00E-06	hypothetical protein HBHAL_1388 [Halobacillus halophilus DSM 2266]
KOG	KOG1441	4.00E-166	Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter
nr	gi\|672176478\|ref\|XP_008808311.1\|	0	PREDICTED: uncharacterized membrane protein At1g06890 [Phoenix dactylifera]
Swissprot	tr\|Q8RXL8\|Y1689_ARATH	0	Uncharacterized membrane protein At1g06890
trEMBL	tr\|W1P939\|W1P939_AMBTC	0	Uncharacterized protein {ECO:0000313\|EMBL:ERN04121.1}
TAIR	AT1G06890	4.00E-166	nodulin MtN21 /EamA-like transporter family protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000007	2900505	2921191	+

Transcript Sequence
>GWHTAAEX003070 TTCCAAACTGCTAAAATATCGTAGAAATTCAGATAAATGCGAGTTGTGAGGCTTCTGTTCGGGATTAATCGGTAGCTCATTATGGGGAGGTAGCTCCATTTCGAGAGTTCAAATCATTTCTGACTTTTGAGAGTTGAAATTGCTAGTTGAGTTGTGATTCATATTGAGATGGGAGATGGCGAGCGGTTCCAACTAGGAACCGTTGGCGCGCTTAGCCTTTCAGTGGTTTCGTCCGTCTCCATTGTAATCTGCAACAAGGCGCTCATGAGCTCTCTCGGCTTTACATTTGCCACAACATTGACAAGCTGGCATCTCTTGGTCACTTTTTGTTCACTTCATGTGGCATTATGGATGAAGCTTTTTGAACACAAATCATTCGATCCCAAGGTGGTTGTGGGGTTCGGAATACTTAATGGAATCTCTATTGGTTTGCTAAACCTAAGCCTGGGTTTCAACTCAGTTGGCTTCTATCAGATGACAAAATTGGCAATAATCCCTTGCACTGTGTTCCTGGAGACTCTGTTCTTTAGGAAGAAATTCAGTCGGAACATCCAATTGTCACTTGCTCTTCTCCTCCTGGGTGTTGGCATTGCTACTGTTACTGATTTGCAGCTCAATATTCTTGGGTCTGTCTTGTCTCTGTTAGCTCTTATCACTACTTGTATCGCCCAAATTATGACAAATAATATTCAGAAGAGGTTCAAGGTTACATCGACCCAGCTTCTTTATCAATCTTGCCCTTACCAGGCATTAACCTTGGTTATTATAGGCCCTTTTTCTGATTGGCTGCTCACTAAGCAAAACGTTTTTGCTTTCAAATACACCCCTCAAGTTCTGGTTTTTATAGTCTTGTCCTGCCTTATATCGGTTTCAGTCAACTTTAGCACATTCCTTGTGATAGGGAGGACTTCGCCTGTAACATATCAGGTGTTGGGCCATCTAAAAACCTGCCTTGTCTTGGCCTTTGGATATGTTCTTCTCCATGATCCCTTCAGCTGGAGAAACATACTGGGGATTCTTATTGCATTATTCGGAATGATCATATATTCTTACTACTGCAATGTTCAAAACCAGCAGAAGCCTGCTGAAGCACATTCCCAACAGCTATCACTGGTAAAAGAAAGTGATCCTCTGCTCAGCAATGCAGAAGATGGAACGCCTGCAGCCGAAGTTTTGCCTTCAAATACCCCGGAATGGAAACCAAATAAAGATCTGCAAGCTTGACGTCTGTCTTTCCTTATTCATCCACGTGGCTTGCTTCCGTTTCTCGTCAGGAGCATATTAACATGTTCTTGATGAGCATCTTATTGTCTTGAACACATGAGAAAATAACAGAAGAAGATAGGCTAAAACTAAAGAAATAACAGCAAACACAGTCATTGAATCATTGGCACAATTTAATTGAATTGAGTGATGTAAAATTAATTGTAATTCTGAATCTTCATTGCCTGAGAGATAGAGGGAGCGAGAGATAAGATCCAATCTTCATGTCTTACCTTTCTCGCTTAAAACCTGATCATTTTTTGGCCTTTTGATTTTAATTCTGTGTCTGTTACTCTCTTTCCTATATGGTAAAGAAAAATGTAGAATTTATATTCTCAGAGATTTATTGAATGCATTCCTTAGTTGCCTCTCCCATCTGCTGGTAACATTGGTACAGGCTCTGCTCTTATTGTTCCTTCTATAGTTCATATTGAGAATAGCAAAATCTAACATTTGTGGTCGTTGATGTTATTGGAAATATTTTTC

Network for GWHGAAEX003070

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF03151.15	TPT	21	294	1.50E-18

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	38.680
SRP064423	SRR2545915	Juvenile tuber	37.600
SRP108465	SRR5643513	five period of Gastrodia elata	52.700
	SRR5643514	five period of Gastrodia elata	56.390
	SRR5643515	five period of Gastrodia elata	54.140
	SRR5643524	five period of Gastrodia elata	54.780
	SRR5643525	five period of Gastrodia elata	66.400
	SRR5643528	five period of Gastrodia elata	65.240
	SRR5643658	five period of Gastrodia elata	63.810
	SRR5643659	five period of Gastrodia elata	38.290
	SRR5643660	five period of Gastrodia elata	35.530
	SRR5643661	five period of Gastrodia elata	38.200
	SRR5643662	five period of Gastrodia elata	29.360
	SRR5643663	five period of Gastrodia elata	36.400
	SRR5643664	five period of Gastrodia elata	24.760
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	46.130
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	62.400
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	51.710
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	38.420
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	40.940
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	39.020
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	38.030
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	40.680
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	57.000
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	47.850
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	75.260
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	75.260
SRP279888	Gastro	Gastrodia elata tuber	36.51
	Juven	Juvenile tuber	34.91
	Mother_Gastro	Mother tuber of Gastrodia elata	40.84
	Mother_Juven	Mother tuber of Juvenile	31.51