Detail information of GWHGAAEX003073/evm.TU.scaffold_13.62


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|118576566|ref|YP_876309.1|2.00E-12ribosomal protein S26 [Cenarchaeum symbiosum A]
KOGKOG17681.00E-6340s ribosomal protein S26
nrgi|672137001|ref|XP_008792210.1|3.38E-72PREDICTED: 40S ribosomal protein S26 [Phoenix dactylifera]
Swissprottr|P49206|RS261_ARATH4.00E-6440S ribosomal protein S26-1
trEMBLtr|M0RHU1|M0RHU1_MUSAM3.00E-71Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr10P13150_001}
TAIRAT2G405901.00E-63Ribosomal protein S26e family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000000734767123482638-
Transcript Sequence

Network for GWHGAAEX003073

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01283.18Ribosomal_S26e11054.10E-54
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K02976RP-S26e, RPS26 Ribosome map03010

Gene Ontology

GO term OntologyName
GO:0006412Biological Processtranslation
GO:0003735Molecular Functionstructural constituent of ribosome
GO:0005840Cellular Componentribosome

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms57.590
SRR2545915Juvenile tuber79.300
SRP108465SRR5643513five period of Gastrodia elata280.680
SRR5643514five period of Gastrodia elata319.060
SRR5643515five period of Gastrodia elata292.950
SRR5643524five period of Gastrodia elata304.620
SRR5643525five period of Gastrodia elata105.640
SRR5643528five period of Gastrodia elata103.900
SRR5643658five period of Gastrodia elata93.550
SRR5643659five period of Gastrodia elata211.730
SRR5643660five period of Gastrodia elata201.060
SRR5643661five period of Gastrodia elata248.270
SRR5643662five period of Gastrodia elata216.250
SRR5643663five period of Gastrodia elata222.710
SRR5643664five period of Gastrodia elata200.510
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1218.840
SRR6049655Rhizomagastrodiae_C368-T10_good_1291.280
SRR6049656Rhizomagastrodiae_C368-T07_good_1258.400
SRR6049657Rhizomagastrodiae_C368-T07_good_1184.530
SRR6049658Rhizomagastrodiae_C368-T04_good_1177.490
SRR6049659Rhizomagastrodiae_C368-T04_good_1123.040
SRR6049660Rhizomagastrodiae_C368-T01_good_1237.380
SRR6049661Rhizomagastrodiae_C368-T04_good_1194.620
SRR6049662Rhizomagastrodiae_C368-T01_good_1344.130
SRR6049663Rhizomagastrodiae_C368-T01_good_1295.870
SRR6049664Rhizomagastrodiae_C368-T10_good_1323.130
SRR6049665Rhizomagastrodiae_C368-T10_good_1323.130
SRP279888GastroGastrodia elata tuber 170.79
JuvenJuvenile tuber250.34
Mother_GastroMother tuber of Gastrodia elata 76.32
Mother_JuvenMother tuber of Juvenile 89.46