Detail information of GWHGAAEX003083/evm.TU.scaffold_13.79


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|661892434|emb|CDP03592.1|1.91E-149unnamed protein product [Coffea canephora]
trEMBLtr|A0A068U5L8|A0A068U5L8_COFCA7.00E-150Coffea canephora
TAIRAT1G638904.00E-100Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000000743277604376204+
Transcript Sequence

Network for GWHGAAEX003083

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF12483.7GIDE862372.00E-37
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006996Biological Processorganelle organization
GO:0016567Biological Processprotein ubiquitination
GO:0004842Molecular Functionubiquitin-protein transferase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms33.010
SRR2545915Juvenile tuber54.540
SRP108465SRR5643513five period of Gastrodia elata35.430
SRR5643514five period of Gastrodia elata35.640
SRR5643515five period of Gastrodia elata36.630
SRR5643524five period of Gastrodia elata36.410
SRR5643525five period of Gastrodia elata48.210
SRR5643528five period of Gastrodia elata26.740
SRR5643658five period of Gastrodia elata34.800
SRR5643659five period of Gastrodia elata37.760
SRR5643660five period of Gastrodia elata40.310
SRR5643661five period of Gastrodia elata40.290
SRR5643662five period of Gastrodia elata44.150
SRR5643663five period of Gastrodia elata46.350
SRR5643664five period of Gastrodia elata41.020
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_138.070
SRR6049655Rhizomagastrodiae_C368-T10_good_124.110
SRR6049656Rhizomagastrodiae_C368-T07_good_138.580
SRR6049657Rhizomagastrodiae_C368-T07_good_140.690
SRR6049658Rhizomagastrodiae_C368-T04_good_144.320
SRR6049659Rhizomagastrodiae_C368-T04_good_146.170
SRR6049660Rhizomagastrodiae_C368-T01_good_139.280
SRR6049661Rhizomagastrodiae_C368-T04_good_141.100
SRR6049662Rhizomagastrodiae_C368-T01_good_136.210
SRR6049663Rhizomagastrodiae_C368-T01_good_135.590
SRR6049664Rhizomagastrodiae_C368-T10_good_131.110
SRR6049665Rhizomagastrodiae_C368-T10_good_131.110
SRP279888GastroGastrodia elata tuber 59.08
JuvenJuvenile tuber52.11
Mother_GastroMother tuber of Gastrodia elata 31.99
Mother_JuvenMother tuber of Juvenile 17.84