Detail information of GWHGAAEX003099/evm.TU.scaffold_13.110
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| KOG | KOG2183 | 2.00E-141 | Prolylcarboxypeptidase (angiotensinase C) |
| nr | gi|255565519|ref|XP_002523750.1| | 6.07E-170 | Lysosomal Pro-X carboxypeptidase, putative [Ricinus communis] |
| Swissprot | tr|Q1PF50|EDA2_ARATH | 2.00E-18 | Probable serine protease EDA2 (Precursor) |
| trEMBL | tr|B9SCN1|B9SCN1_RICCO | 2.00E-170 | Lysosomal Pro-X carboxypeptidase, putative {ECO:0000313|EMBL:EEF38690.1} |
| TAIR | AT5G22860 | 2.00E-141 | Serine carboxypeptidase S28 family protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000007 | 5610597 | 5612966 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX003099
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module2 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF05577.11 | Peptidase_S28 | 42 | 456 | 2.40E-71 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K01285 | PRCP | Renin-angiotensin system | map04614 |
| Protein digestion and absorption | map04974 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006508 | Biological Process | proteolysis |
| GO:0008236 | Molecular Function | serine-type peptidase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 0.000 |
| SRR2545915 | Juvenile tuber | 0.000 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 14.200 |
| SRR5643514 | five period of Gastrodia elata | 0.900 | |
| SRR5643515 | five period of Gastrodia elata | 3.450 | |
| SRR5643524 | five period of Gastrodia elata | 0.910 | |
| SRR5643525 | five period of Gastrodia elata | 0.100 | |
| SRR5643528 | five period of Gastrodia elata | 0.100 | |
| SRR5643658 | five period of Gastrodia elata | 0.270 | |
| SRR5643659 | five period of Gastrodia elata | 0.040 | |
| SRR5643660 | five period of Gastrodia elata | 0.000 | |
| SRR5643661 | five period of Gastrodia elata | 0.050 | |
| SRR5643662 | five period of Gastrodia elata | 0.040 | |
| SRR5643663 | five period of Gastrodia elata | 0.070 | |
| SRR5643664 | five period of Gastrodia elata | 0.080 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 68.360 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 119.790 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 54.750 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 33.440 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 40.870 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 31.010 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 20.010 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 26.090 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 18.610 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 39.900 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 100.710 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 100.710 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 0.01 |
| Juven | Juvenile tuber | 0.07 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 0.60 | |
| Mother_Juven | Mother tuber of Juvenile | 0.24 |