Detail information of GWHGAAEX003100/evm.TU.scaffold_13.111
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|108804931|ref|YP_644868.1| | 1.00E-74 | HAD family hydrolase [Rubrobacter xylanophilus DSM 9941] |
| KOG | KOG1221 | 6.00E-160 | Acyl-CoA reductase |
| nr | gi|672162801|ref|XP_008801227.1| | 0 | PREDICTED: probable fatty acyl-CoA reductase 4 [Phoenix dactylifera] |
| Swissprot | tr|Q9XGY7|FAR_SIMCH | 4.00E-166 | Alcohol-forming fatty acyl-CoA reductase |
| trEMBL | tr|M0T8D1|M0T8D1_MUSAM | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr6P19330_001} |
| TAIR | AT3G44540 | 6.00E-160 | fatty acid reductase 4 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000007 | 5686758 | 5709787 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX003100
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module4 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF07993.11 | NAD_binding_4 | 17 | 319 | 5.20E-75 |
| PF03015.18 | Sterile | 393 | 486 | 1.90E-17 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K13356 | FAR | Synthesis and degradation of ketone bodies | map00072 |
| Peroxisome | map04146 | ||
| Longevity regulating pathway - worm | map04212 |
Gene Ontology
| GO term | Ontology | Name |
|---|
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 14.230 |
| SRR2545915 | Juvenile tuber | 65.870 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 49.520 |
| SRR5643514 | five period of Gastrodia elata | 10.680 | |
| SRR5643515 | five period of Gastrodia elata | 110.600 | |
| SRR5643524 | five period of Gastrodia elata | 42.580 | |
| SRR5643525 | five period of Gastrodia elata | 0.940 | |
| SRR5643528 | five period of Gastrodia elata | 23.860 | |
| SRR5643658 | five period of Gastrodia elata | 2.010 | |
| SRR5643659 | five period of Gastrodia elata | 55.970 | |
| SRR5643660 | five period of Gastrodia elata | 59.210 | |
| SRR5643661 | five period of Gastrodia elata | 44.050 | |
| SRR5643662 | five period of Gastrodia elata | 83.850 | |
| SRR5643663 | five period of Gastrodia elata | 58.600 | |
| SRR5643664 | five period of Gastrodia elata | 18.780 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 0.730 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 3.790 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 1.750 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 1.420 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 0.640 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 0.640 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 1.330 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 1.600 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 1.330 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 0.590 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 2.030 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 2.030 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 27.94 |
| Juven | Juvenile tuber | 16.60 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 136.64 | |
| Mother_Juven | Mother tuber of Juvenile | 137.89 |