Detail information of GWHGAAEX003107/evm.TU.scaffold_13.122
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|440681521|ref|YP_007156316.1| | 1.00E-55 | Caffeoyl-CoA O-methyltransferase [Anabaena cylindrica PCC 7122] |
| KOG | KOG1663 | 1.00E-94 | O-methyltransferase |
| nr | gi|326486289|gb|ADZ76153.1| | 9.49E-114 | OMT4 [Vanilla planifolia] |
| Swissprot | tr|Q9C9W3|CAMT1_ARATH | 4.00E-95 | Putative caffeoyl-CoA O-methyltransferase At1g67980 |
| trEMBL | tr|F2YP45|F2YP45_VANPL | 4.00E-114 | OMT4 {ECO:0000313|EMBL:ADZ76153.1} |
| TAIR | AT1G67980 | 1.00E-94 | caffeoyl-CoA 3-O-methyltransferase |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000007 | 6197865 | 6198893 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX003107
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module12 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF01596.16 | Methyltransf_3 | 24 | 237 | 7.60E-87 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K00588 | E2.1.1.104 | Metabolic pathways | map01100 |
| Biosynthesis of secondary metabolites | map01110 | ||
| Phenylpropanoid biosynthesis | map00940 | ||
| Flavonoid biosynthesis | map00941 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0008171 | Molecular Function | O-methyltransferase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 308.480 |
| SRR2545915 | Juvenile tuber | 155.250 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 654.150 |
| SRR5643514 | five period of Gastrodia elata | 599.950 | |
| SRR5643515 | five period of Gastrodia elata | 987.890 | |
| SRR5643524 | five period of Gastrodia elata | 900.440 | |
| SRR5643525 | five period of Gastrodia elata | 314.620 | |
| SRR5643528 | five period of Gastrodia elata | 584.340 | |
| SRR5643658 | five period of Gastrodia elata | 294.340 | |
| SRR5643659 | five period of Gastrodia elata | 68.220 | |
| SRR5643660 | five period of Gastrodia elata | 42.850 | |
| SRR5643661 | five period of Gastrodia elata | 86.650 | |
| SRR5643662 | five period of Gastrodia elata | 110.870 | |
| SRR5643663 | five period of Gastrodia elata | 86.560 | |
| SRR5643664 | five period of Gastrodia elata | 46.890 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 404.920 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 609.430 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 449.010 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 237.010 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 621.550 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 552.700 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 354.510 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 397.220 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 591.540 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 795.360 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 937.120 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 937.120 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 180.19 |
| Juven | Juvenile tuber | 28.80 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 2,215.59 | |
| Mother_Juven | Mother tuber of Juvenile | 931.76 |