Detail information of GWHGAAEX003115/evm.TU.scaffold_13.134


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672169616|ref|XP_008804844.1|0PREDICTED: glucan endo-1,3-beta-glucosidase 14 [Phoenix dactylifera]
Swissprottr|Q9ZQG9|E1314_ARATH2.00E-151Glucan endo-1,3-beta-glucosidase 14 (Precursor)
trEMBLtr|M0RVK0|M0RVK0_MUSAM2.00E-173Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr11P26200_001}
TAIRAT2G275003.00E-151Glycosyl hydrolase superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000000768076396812595+
Transcript Sequence

Network for GWHGAAEX003115

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00332.17Glyco_hydro_17283451.10E-96
Protein Sequence

Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGH17

KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0005975Biological Processcarbohydrate metabolic process
GO:0004553Molecular Functionhydrolase activity, hydrolyzing O-glycosyl compounds

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms132.010
SRR2545915Juvenile tuber73.330
SRP108465SRR5643513five period of Gastrodia elata61.540
SRR5643514five period of Gastrodia elata40.660
SRR5643515five period of Gastrodia elata50.400
SRR5643524five period of Gastrodia elata53.330
SRR5643525five period of Gastrodia elata65.840
SRR5643528five period of Gastrodia elata76.160
SRR5643658five period of Gastrodia elata49.180
SRR5643659five period of Gastrodia elata52.290
SRR5643660five period of Gastrodia elata50.550
SRR5643661five period of Gastrodia elata47.720
SRR5643662five period of Gastrodia elata54.530
SRR5643663five period of Gastrodia elata49.030
SRR5643664five period of Gastrodia elata51.680
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_158.660
SRR6049655Rhizomagastrodiae_C368-T10_good_1126.670
SRR6049656Rhizomagastrodiae_C368-T07_good_160.730
SRR6049657Rhizomagastrodiae_C368-T07_good_164.520
SRR6049658Rhizomagastrodiae_C368-T04_good_185.970
SRR6049659Rhizomagastrodiae_C368-T04_good_188.760
SRR6049660Rhizomagastrodiae_C368-T01_good_163.560
SRR6049661Rhizomagastrodiae_C368-T04_good_180.400
SRR6049662Rhizomagastrodiae_C368-T01_good_142.260
SRR6049663Rhizomagastrodiae_C368-T01_good_153.580
SRR6049664Rhizomagastrodiae_C368-T10_good_171.640
SRR6049665Rhizomagastrodiae_C368-T10_good_171.640
SRP279888GastroGastrodia elata tuber 95.77
JuvenJuvenile tuber74.94
Mother_GastroMother tuber of Gastrodia elata 130.21
Mother_JuvenMother tuber of Juvenile 143.13