Detail information of GWHGAAEX003118/evm.TU.scaffold_13.139


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG42706.00E-131GTPase-activator protein
nrgi|672108922|ref|XP_008787611.1|3.71E-161PREDICTED: rho GTPase-activating protein 5-like [Phoenix dactylifera]
Swissprottr|Q9FMR1|RGAP1_ARATH2.00E-131Rho GTPase-activating protein 1
trEMBLtr|M0T6L7|M0T6L7_MUSAM1.00E-153Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr6P13190_001}
TAIRAT5G224006.00E-131Rho GTPase activating protein with PAK-box/P21-Rho-binding domain

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000000769999917004740+
Transcript Sequence

Network for GWHGAAEX003118

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00786.27PBD69966.20E-05
PF00620.26RhoGAP1322664.70E-21
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0007165Biological Processsignal transduction

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms13.250
SRR2545915Juvenile tuber14.590
SRP108465SRR5643513five period of Gastrodia elata17.870
SRR5643514five period of Gastrodia elata19.240
SRR5643515five period of Gastrodia elata17.130
SRR5643524five period of Gastrodia elata19.950
SRR5643525five period of Gastrodia elata16.350
SRR5643528five period of Gastrodia elata17.230
SRR5643658five period of Gastrodia elata28.130
SRR5643659five period of Gastrodia elata23.550
SRR5643660five period of Gastrodia elata21.380
SRR5643661five period of Gastrodia elata18.690
SRR5643662five period of Gastrodia elata21.300
SRR5643663five period of Gastrodia elata24.380
SRR5643664five period of Gastrodia elata18.700
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_118.150
SRR6049655Rhizomagastrodiae_C368-T10_good_119.030
SRR6049656Rhizomagastrodiae_C368-T07_good_118.540
SRR6049657Rhizomagastrodiae_C368-T07_good_115.240
SRR6049658Rhizomagastrodiae_C368-T04_good_112.960
SRR6049659Rhizomagastrodiae_C368-T04_good_114.350
SRR6049660Rhizomagastrodiae_C368-T01_good_113.920
SRR6049661Rhizomagastrodiae_C368-T04_good_116.390
SRR6049662Rhizomagastrodiae_C368-T01_good_118.950
SRR6049663Rhizomagastrodiae_C368-T01_good_115.820
SRR6049664Rhizomagastrodiae_C368-T10_good_122.890
SRR6049665Rhizomagastrodiae_C368-T10_good_122.890
SRP279888GastroGastrodia elata tuber 15.81
JuvenJuvenile tuber12.42
Mother_GastroMother tuber of Gastrodia elata 18.89
Mother_JuvenMother tuber of Juvenile 12.08