Detail information of GWHGAAEX003122/evm.TU.scaffold_13.148


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|721697544|ref|XP_010227343.1|6.04E-28PREDICTED: transcription repressor OFP13-like [Brachypodium distachyon]
Swissprottr|Q9FMC8|OPF13_ARATH5.00E-23Transcription repressor OFP13
trEMBLtr|C5YAZ1|C5YAZ1_SORBI5.00E-27Putative uncharacterized protein Sb06g033540 {ECO:0000313|EMBL:EES11685.1}
TAIRAT5G048202.00E-22ovate family protein 13

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000000775199167520696+
Transcript Sequence

Network for GWHGAAEX003122

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04844.12Ovate1221798.00E-20
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyOFP

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms2.670
SRR2545915Juvenile tuber1.310
SRP108465SRR5643513five period of Gastrodia elata1.130
SRR5643514five period of Gastrodia elata2.260
SRR5643515five period of Gastrodia elata1.520
SRR5643524five period of Gastrodia elata2.370
SRR5643525five period of Gastrodia elata2.410
SRR5643528five period of Gastrodia elata3.180
SRR5643658five period of Gastrodia elata3.640
SRR5643659five period of Gastrodia elata1.320
SRR5643660five period of Gastrodia elata1.120
SRR5643661five period of Gastrodia elata2.610
SRR5643662five period of Gastrodia elata4.270
SRR5643663five period of Gastrodia elata1.710
SRR5643664five period of Gastrodia elata2.690
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_11.390
SRR6049655Rhizomagastrodiae_C368-T10_good_11.190
SRR6049656Rhizomagastrodiae_C368-T07_good_11.830
SRR6049657Rhizomagastrodiae_C368-T07_good_12.010
SRR6049658Rhizomagastrodiae_C368-T04_good_11.330
SRR6049659Rhizomagastrodiae_C368-T04_good_11.440
SRR6049660Rhizomagastrodiae_C368-T01_good_11.940
SRR6049661Rhizomagastrodiae_C368-T04_good_10.360
SRR6049662Rhizomagastrodiae_C368-T01_good_13.760
SRR6049663Rhizomagastrodiae_C368-T01_good_12.290
SRR6049664Rhizomagastrodiae_C368-T10_good_13.810
SRR6049665Rhizomagastrodiae_C368-T10_good_13.810
SRP279888GastroGastrodia elata tuber 3.05
JuvenJuvenile tuber0.85
Mother_GastroMother tuber of Gastrodia elata 3.99
Mother_JuvenMother tuber of Juvenile 0.31