Detail information of GWHGAAEX003123/evm.TU.scaffold_13.151


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|428319458|ref|YP_007117340.1|5.00E-104Peroxiredoxin [Oscillatoria nigro-viridis PCC 7112]
KOGKOG08524.00E-132Alkyl hydroperoxide reductase, thiol specific antioxidant and related enzymes
nrgi|595806426|ref|XP_007202444.1|1.28E-143hypothetical protein PRUPE_ppa009960mg [Prunus persica]
Swissprottr|Q9C5R8|BAS1B_ARATH2.00E-1322-Cys peroxiredoxin BAS1-like, chloroplastic (Precursor)
trEMBLtr|M5W311|M5W311_PRUPE5.00E-144Uncharacterized protein {ECO:0000313|EMBL:EMJ03643.1}
TAIRAT5G062904.00E-1322-cysteine peroxiredoxin B

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000000775954387624178+
Transcript Sequence

Network for GWHGAAEX003123

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module5

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00578.20AhpC-TSA752081.30E-38
PF10417.81-cysPrx_C2292631.10E-10
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K03386PRDX2_4, ahpC Apoptosis - fly map04214

Gene Ontology

GO term OntologyName
GO:0045454Biological Processcell redox homeostasis
GO:0055114Biological Processoxidation-reduction process
GO:0016491Molecular Functionoxidoreductase activity
GO:0051920Molecular Functionperoxiredoxin activity
GO:0016209Molecular Functionantioxidant activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms17.030
SRR2545915Juvenile tuber58.090
SRP108465SRR5643513five period of Gastrodia elata72.080
SRR5643514five period of Gastrodia elata97.330
SRR5643515five period of Gastrodia elata90.510
SRR5643524five period of Gastrodia elata84.700
SRR5643525five period of Gastrodia elata35.100
SRR5643528five period of Gastrodia elata56.050
SRR5643658five period of Gastrodia elata73.210
SRR5643659five period of Gastrodia elata26.860
SRR5643660five period of Gastrodia elata17.620
SRR5643661five period of Gastrodia elata25.480
SRR5643662five period of Gastrodia elata15.920
SRR5643663five period of Gastrodia elata25.800
SRR5643664five period of Gastrodia elata12.670
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_172.760
SRR6049655Rhizomagastrodiae_C368-T10_good_181.500
SRR6049656Rhizomagastrodiae_C368-T07_good_181.780
SRR6049657Rhizomagastrodiae_C368-T07_good_161.400
SRR6049658Rhizomagastrodiae_C368-T04_good_137.170
SRR6049659Rhizomagastrodiae_C368-T04_good_120.600
SRR6049660Rhizomagastrodiae_C368-T01_good_133.820
SRR6049661Rhizomagastrodiae_C368-T04_good_147.150
SRR6049662Rhizomagastrodiae_C368-T01_good_159.010
SRR6049663Rhizomagastrodiae_C368-T01_good_136.540
SRR6049664Rhizomagastrodiae_C368-T10_good_181.500
SRR6049665Rhizomagastrodiae_C368-T10_good_181.500
SRP279888GastroGastrodia elata tuber 11.19
JuvenJuvenile tuber21.37
Mother_GastroMother tuber of Gastrodia elata 19.28
Mother_JuvenMother tuber of Juvenile 22.02