Detail information of GWHGAAEX003134/evm.TU.scaffold_13.172


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|695013266|ref|XP_009393411.1|1.23E-67PREDICTED: G-box-binding factor 4-like [Musa acuminata subsp. malaccensis]
Swissprottr|P42777|GBF4_ARATH1.00E-28G-box-binding factor 4
trEMBLtr|M0SGW3|M0SGW3_MUSAM2.00E-65Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr3P22470_001}
TAIRAT5G440802.00E-32Basic-leucine zipper (bZIP) transcription factor family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000000788020818852005+
Transcript Sequence

Network for GWHGAAEX003134

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00170.20bZIP_12002521.20E-16
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilybZIP

KEGG pathway

KO Enzyme pathway mapID
K14432ABF Plant hormone signal transduction map04075

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms14.470
SRR2545915Juvenile tuber23.020
SRP108465SRR5643513five period of Gastrodia elata26.480
SRR5643514five period of Gastrodia elata19.500
SRR5643515five period of Gastrodia elata22.070
SRR5643524five period of Gastrodia elata20.760
SRR5643525five period of Gastrodia elata32.170
SRR5643528five period of Gastrodia elata33.660
SRR5643658five period of Gastrodia elata27.570
SRR5643659five period of Gastrodia elata36.520
SRR5643660five period of Gastrodia elata36.020
SRR5643661five period of Gastrodia elata35.330
SRR5643662five period of Gastrodia elata35.740
SRR5643663five period of Gastrodia elata30.920
SRR5643664five period of Gastrodia elata30.580
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_112.170
SRR6049655Rhizomagastrodiae_C368-T10_good_17.530
SRR6049656Rhizomagastrodiae_C368-T07_good_115.880
SRR6049657Rhizomagastrodiae_C368-T07_good_113.500
SRR6049658Rhizomagastrodiae_C368-T04_good_114.630
SRR6049659Rhizomagastrodiae_C368-T04_good_116.130
SRR6049660Rhizomagastrodiae_C368-T01_good_118.200
SRR6049661Rhizomagastrodiae_C368-T04_good_113.570
SRR6049662Rhizomagastrodiae_C368-T01_good_118.450
SRR6049663Rhizomagastrodiae_C368-T01_good_118.850
SRR6049664Rhizomagastrodiae_C368-T10_good_123.080
SRR6049665Rhizomagastrodiae_C368-T10_good_123.080
SRP279888GastroGastrodia elata tuber 31.46
JuvenJuvenile tuber16.85
Mother_GastroMother tuber of Gastrodia elata 9.07
Mother_JuvenMother tuber of Juvenile 8.38