Detail information of GWHGAAEX003139/evm.TU.scaffold_13.177


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|292493039|ref|YP_003528478.1|3.00E-13(2R)-phospho-3-sulfolactate synthase ComA [Nitrosococcus halophilus Nc 4]
nrgi|296085766|emb|CBI29577.3|5.71E-32unnamed protein product [Vitis vinifera]
trEMBLtr|D7TGF2|D7TGF2_VITVI2.00E-32Putative uncharacterized protein {ECO:0000313|EMBL:CBI29577.3}
TAIRAT4G213205.00E-20Aldolase-type TIM barrel family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000000790597989075296-
Transcript Sequence

Network for GWHGAAEX003139

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module3

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02679.14ComA2886.30E-19
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003824Molecular Functioncatalytic activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms5.990
SRR2545915Juvenile tuber4.200
SRP108465SRR5643513five period of Gastrodia elata2.430
SRR5643514five period of Gastrodia elata1.280
SRR5643515five period of Gastrodia elata1.810
SRR5643524five period of Gastrodia elata1.200
SRR5643525five period of Gastrodia elata2.090
SRR5643528five period of Gastrodia elata1.480
SRR5643658five period of Gastrodia elata1.110
SRR5643659five period of Gastrodia elata9.100
SRR5643660five period of Gastrodia elata9.100
SRR5643661five period of Gastrodia elata5.830
SRR5643662five period of Gastrodia elata2.070
SRR5643663five period of Gastrodia elata3.480
SRR5643664five period of Gastrodia elata3.320
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_10.450
SRR6049655Rhizomagastrodiae_C368-T10_good_10.260
SRR6049656Rhizomagastrodiae_C368-T07_good_11.020
SRR6049657Rhizomagastrodiae_C368-T07_good_11.350
SRR6049658Rhizomagastrodiae_C368-T04_good_10.540
SRR6049659Rhizomagastrodiae_C368-T04_good_10.760
SRR6049660Rhizomagastrodiae_C368-T01_good_10.470
SRR6049661Rhizomagastrodiae_C368-T04_good_11.040
SRR6049662Rhizomagastrodiae_C368-T01_good_10.950
SRR6049663Rhizomagastrodiae_C368-T01_good_10.850
SRR6049664Rhizomagastrodiae_C368-T10_good_11.320
SRR6049665Rhizomagastrodiae_C368-T10_good_11.320
SRP279888GastroGastrodia elata tuber 2.10
JuvenJuvenile tuber0.83
Mother_GastroMother tuber of Gastrodia elata 2.72
Mother_JuvenMother tuber of Juvenile 1.53