Detail information of GWHGAAEX003149/evm.TU.scaffold_13.198


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG17351.00E-77Actin depolymerizing factor
nrgi|743841990|ref|XP_010937681.1|1.02E-85PREDICTED: actin-depolymerizing factor 7-like [Elaeis guineensis]
Swissprottr|Q9ZSK3|ADF4_ARATH2.00E-80Actin-depolymerizing factor 4
trEMBLtr|B3TLN2|B3TLN2_ELAGV4.00E-86Actin depolymerizing factor {ECO:0000313|EMBL:ACF06463.1}
TAIRAT3G460101.00E-77actin depolymerizing factor 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000071001612210017522+
Transcript Sequence

Network for GWHGAAEX003149

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00241.19Cofilin_ADF141352.20E-37
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K05765CFL Regulation of actin cytoskeleton map04810
Fc gamma R-mediated phagocytosismap04666
Axon guidancemap04360

Gene Ontology

GO term OntologyName
GO:0030042Biological Processactin filament depolymerization
GO:0003779Molecular Functionactin binding
GO:0015629Cellular Componentactin cytoskeleton

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms470.690
SRR2545915Juvenile tuber660.660
SRP108465SRR5643513five period of Gastrodia elata519.930
SRR5643514five period of Gastrodia elata522.670
SRR5643515five period of Gastrodia elata528.010
SRR5643524five period of Gastrodia elata526.320
SRR5643525five period of Gastrodia elata1137.920
SRR5643528five period of Gastrodia elata775.170
SRR5643658five period of Gastrodia elata1180.250
SRR5643659five period of Gastrodia elata490.130
SRR5643660five period of Gastrodia elata502.400
SRR5643661five period of Gastrodia elata504.040
SRR5643662five period of Gastrodia elata538.170
SRR5643663five period of Gastrodia elata477.310
SRR5643664five period of Gastrodia elata508.510
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1418.510
SRR6049655Rhizomagastrodiae_C368-T10_good_1751.670
SRR6049656Rhizomagastrodiae_C368-T07_good_1492.940
SRR6049657Rhizomagastrodiae_C368-T07_good_1448.290
SRR6049658Rhizomagastrodiae_C368-T04_good_1518.420
SRR6049659Rhizomagastrodiae_C368-T04_good_1529.460
SRR6049660Rhizomagastrodiae_C368-T01_good_1446.350
SRR6049661Rhizomagastrodiae_C368-T04_good_1539.670
SRR6049662Rhizomagastrodiae_C368-T01_good_1465.290
SRR6049663Rhizomagastrodiae_C368-T01_good_1488.520
SRR6049664Rhizomagastrodiae_C368-T10_good_1469.410
SRR6049665Rhizomagastrodiae_C368-T10_good_1469.410
SRP279888GastroGastrodia elata tuber 635.39
JuvenJuvenile tuber494.96
Mother_GastroMother tuber of Gastrodia elata 549.40
Mother_JuvenMother tuber of Juvenile 349.54