Detail information of GWHGAAEX003151/evm.TU.scaffold_13.202


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG17352.00E-74Actin depolymerizing factor
nrgi|743841990|ref|XP_010937681.1|3.60E-81PREDICTED: actin-depolymerizing factor 7-like [Elaeis guineensis]
Swissprottr|Q9ZSK3|ADF4_ARATH3.00E-76Actin-depolymerizing factor 4
trEMBLtr|B3TLN2|B3TLN2_ELAGV1.00E-81Actin depolymerizing factor {ECO:0000313|EMBL:ACF06463.1}
TAIRAT3G460102.00E-74actin depolymerizing factor 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000071003292310035886-
Transcript Sequence

Network for GWHGAAEX003151

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00241.19Cofilin_ADF1022241.50E-35
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K05765CFL Regulation of actin cytoskeleton map04810
Fc gamma R-mediated phagocytosismap04666
Axon guidancemap04360

Gene Ontology

GO term OntologyName
GO:0030042Biological Processactin filament depolymerization
GO:0003779Molecular Functionactin binding
GO:0015629Cellular Componentactin cytoskeleton

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms111.880
SRR2545915Juvenile tuber128.080
SRP108465SRR5643513five period of Gastrodia elata122.090
SRR5643514five period of Gastrodia elata211.410
SRR5643515five period of Gastrodia elata162.670
SRR5643524five period of Gastrodia elata220.200
SRR5643525five period of Gastrodia elata335.720
SRR5643528five period of Gastrodia elata514.120
SRR5643658five period of Gastrodia elata376.840
SRR5643659five period of Gastrodia elata90.910
SRR5643660five period of Gastrodia elata88.820
SRR5643661five period of Gastrodia elata103.480
SRR5643662five period of Gastrodia elata95.580
SRR5643663five period of Gastrodia elata86.080
SRR5643664five period of Gastrodia elata78.630
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1132.490
SRR6049655Rhizomagastrodiae_C368-T10_good_1156.440
SRR6049656Rhizomagastrodiae_C368-T07_good_1146.970
SRR6049657Rhizomagastrodiae_C368-T07_good_196.160
SRR6049658Rhizomagastrodiae_C368-T04_good_1117.040
SRR6049659Rhizomagastrodiae_C368-T04_good_1114.320
SRR6049660Rhizomagastrodiae_C368-T01_good_1101.240
SRR6049661Rhizomagastrodiae_C368-T04_good_199.660
SRR6049662Rhizomagastrodiae_C368-T01_good_1160.990
SRR6049663Rhizomagastrodiae_C368-T01_good_1144.260
SRR6049664Rhizomagastrodiae_C368-T10_good_1225.630
SRR6049665Rhizomagastrodiae_C368-T10_good_1225.630
SRP279888GastroGastrodia elata tuber 118.44
JuvenJuvenile tuber74.24
Mother_GastroMother tuber of Gastrodia elata 262.50
Mother_JuvenMother tuber of Juvenile 133.21