Detail information of GWHGAAEX003160/evm.TU.scaffold_130.11
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|427718651|ref|YP_007066645.1| | 1.00E-31 | monooxygenase [Calothrix sp. PCC 7507] |
| KOG | KOG0156 | 0 | Cytochrome P450 CYP2 subfamily |
| nr | gi|594139504|gb|AHL83556.1| | 0 | flavonoid-3'-hydroxylase [Iris x hollandica] |
| Swissprot | tr|Q9SD85|F3PH_ARATH | 0 | Flavonoid 3'-monooxygenase |
| trEMBL | tr|W8REB2|W8REB2_IRIHO | 0 | Flavonoid-3'-hydroxylase {ECO:0000313|EMBL:AHL83556.1} |
| TAIR | AT5G07990 | 0 | Cytochrome P450 superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000129 | 309458 | 313042 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX003160
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module6 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00067.21 | p450 | 34 | 483 | 1.60E-94 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Cytochrome P450 Family | CYP75B1 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K05280 | CYP75B1 | Metabolic pathways | map01100 |
| Biosynthesis of secondary metabolites | map01110 | ||
| Flavonoid biosynthesis | map00941 | ||
| Flavone and flavonol biosynthesis | map00944 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0055114 | Biological Process | oxidation-reduction process |
| GO:0005506 | Molecular Function | iron ion binding |
| GO:0016705 | Molecular Function | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen |
| GO:0020037 | Molecular Function | heme binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 21.510 |
| SRR2545915 | Juvenile tuber | 18.580 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 72.380 |
| SRR5643514 | five period of Gastrodia elata | 48.310 | |
| SRR5643515 | five period of Gastrodia elata | 47.230 | |
| SRR5643524 | five period of Gastrodia elata | 56.640 | |
| SRR5643525 | five period of Gastrodia elata | 33.050 | |
| SRR5643528 | five period of Gastrodia elata | 24.190 | |
| SRR5643658 | five period of Gastrodia elata | 27.090 | |
| SRR5643659 | five period of Gastrodia elata | 69.140 | |
| SRR5643660 | five period of Gastrodia elata | 85.830 | |
| SRR5643661 | five period of Gastrodia elata | 64.160 | |
| SRR5643662 | five period of Gastrodia elata | 65.520 | |
| SRR5643663 | five period of Gastrodia elata | 77.500 | |
| SRR5643664 | five period of Gastrodia elata | 80.850 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 36.880 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 39.270 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 36.550 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 26.090 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 6.230 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 2.760 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 6.800 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 7.680 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 9.940 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 2.680 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 50.100 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 50.100 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 69.51 |
| Juven | Juvenile tuber | 31.87 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 55.43 | |
| Mother_Juven | Mother tuber of Juvenile | 36.90 |