Detail information of GWHGAAEX003163/evm.TU.scaffold_130.14


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|113477255|ref|YP_723316.1|2.00E-28small GTP-binding protein [Trichodesmium erythraeum IMS101]
KOGKOG06193.00E-96FOG: Leucine rich repeat
nrgi|449477156|ref|XP_004154946.1|4.22E-112PREDICTED: LRR repeats and ubiquitin-like domain-containing protein At2g30105-like [Cucumis sativus]
Swissprottr|B9F655|PIRL7_ORYSJ1.00E-106Plant intracellular Ras-group-related LRR protein 7
trEMBLtr|A0A0A0LPH7|A0A0A0LPH7_CUCSA2.00E-112Uncharacterized protein {ECO:0000313|EMBL:KGN63713.1}
TAIRAT5G079103.00E-96Leucine-rich repeat (LRR) family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000129367044411481+
Transcript Sequence

Network for GWHGAAEX003163

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13855.5LRR_8461026.60E-10
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms18.030
SRR2545915Juvenile tuber13.700
SRP108465SRR5643513five period of Gastrodia elata12.240
SRR5643514five period of Gastrodia elata13.840
SRR5643515five period of Gastrodia elata12.990
SRR5643524five period of Gastrodia elata14.410
SRR5643525five period of Gastrodia elata15.730
SRR5643528five period of Gastrodia elata16.140
SRR5643658five period of Gastrodia elata19.350
SRR5643659five period of Gastrodia elata11.170
SRR5643660five period of Gastrodia elata9.140
SRR5643661five period of Gastrodia elata10.480
SRR5643662five period of Gastrodia elata8.540
SRR5643663five period of Gastrodia elata8.990
SRR5643664five period of Gastrodia elata9.500
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_18.660
SRR6049655Rhizomagastrodiae_C368-T10_good_121.560
SRR6049656Rhizomagastrodiae_C368-T07_good_19.280
SRR6049657Rhizomagastrodiae_C368-T07_good_17.720
SRR6049658Rhizomagastrodiae_C368-T04_good_18.640
SRR6049659Rhizomagastrodiae_C368-T04_good_110.330
SRR6049660Rhizomagastrodiae_C368-T01_good_16.630
SRR6049661Rhizomagastrodiae_C368-T04_good_17.900
SRR6049662Rhizomagastrodiae_C368-T01_good_18.240
SRR6049663Rhizomagastrodiae_C368-T01_good_17.430
SRR6049664Rhizomagastrodiae_C368-T10_good_113.690
SRR6049665Rhizomagastrodiae_C368-T10_good_113.690
SRP279888GastroGastrodia elata tuber 12.25
JuvenJuvenile tuber14.67
Mother_GastroMother tuber of Gastrodia elata 15.41
Mother_JuvenMother tuber of Juvenile 12.95