Detail information of GWHGAAEX003182/evm.TU.scaffold_130.37


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|288942517|ref|YP_003444757.1|4.00E-30alpha-L-glutamate ligase [Allochromatium vinosum DSM 180]
nrgi|514735575|ref|XP_004958192.1|0PREDICTED: probable indole-3-acetic acid-amido synthetase GH3.8-like [Setaria italica]
Swissprottr|Q0D4Z6|GH38_ORYSJ0Probable indole-3-acetic acid-amido synthetase GH3.8
trEMBLtr|K3ZRM1|K3ZRM1_SETIT0Uncharacterized protein {ECO:0000313|EnsemblPlants:Si029251m}
TAIRAT2G149600Auxin-responsive GH3 family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000129864873867148-
Transcript Sequence

Network for GWHGAAEX003182

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03321.12GH3305748.60E-189
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K14487GH3 Plant hormone signal transduction map04075

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms7.700
SRR2545915Juvenile tuber22.750
SRP108465SRR5643513five period of Gastrodia elata30.060
SRR5643514five period of Gastrodia elata52.760
SRR5643515five period of Gastrodia elata47.010
SRR5643524five period of Gastrodia elata50.710
SRR5643525five period of Gastrodia elata16.880
SRR5643528five period of Gastrodia elata16.190
SRR5643658five period of Gastrodia elata15.310
SRR5643659five period of Gastrodia elata46.370
SRR5643660five period of Gastrodia elata46.890
SRR5643661five period of Gastrodia elata47.530
SRR5643662five period of Gastrodia elata38.850
SRR5643663five period of Gastrodia elata36.250
SRR5643664five period of Gastrodia elata35.810
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_132.040
SRR6049655Rhizomagastrodiae_C368-T10_good_129.040
SRR6049656Rhizomagastrodiae_C368-T07_good_131.070
SRR6049657Rhizomagastrodiae_C368-T07_good_123.790
SRR6049658Rhizomagastrodiae_C368-T04_good_141.290
SRR6049659Rhizomagastrodiae_C368-T04_good_134.610
SRR6049660Rhizomagastrodiae_C368-T01_good_129.220
SRR6049661Rhizomagastrodiae_C368-T04_good_129.370
SRR6049662Rhizomagastrodiae_C368-T01_good_174.110
SRR6049663Rhizomagastrodiae_C368-T01_good_176.870
SRR6049664Rhizomagastrodiae_C368-T10_good_148.340
SRR6049665Rhizomagastrodiae_C368-T10_good_148.340
SRP279888GastroGastrodia elata tuber 38.05
JuvenJuvenile tuber41.56
Mother_GastroMother tuber of Gastrodia elata 40.89
Mother_JuvenMother tuber of Juvenile 30.58