Detail information of GWHGAAEX003186/evm.TU.scaffold_130.41


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|288942517|ref|YP_003444757.1|2.00E-31alpha-L-glutamate ligase [Allochromatium vinosum DSM 180]
nrgi|743837952|ref|XP_010936557.1|0PREDICTED: probable indole-3-acetic acid-amido synthetase GH3.8 isoform X1 [Elaeis guineensis]
Swissprottr|Q0D4Z6|GH38_ORYSJ0Probable indole-3-acetic acid-amido synthetase GH3.8
trEMBLtr|B9FY76|B9FY76_ORYSJ0Putative uncharacterized protein {ECO:0000313|EMBL:EEE67513.1}
TAIRAT2G149600Auxin-responsive GH3 family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000129892119894106+
Transcript Sequence

Network for GWHGAAEX003186

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03321.12GH3305715.40E-186
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K14487GH3 Plant hormone signal transduction map04075

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms575.040
SRR2545915Juvenile tuber115.570
SRP108465SRR5643513five period of Gastrodia elata726.330
SRR5643514five period of Gastrodia elata375.930
SRR5643515five period of Gastrodia elata496.430
SRR5643524five period of Gastrodia elata465.100
SRR5643525five period of Gastrodia elata477.270
SRR5643528five period of Gastrodia elata1259.540
SRR5643658five period of Gastrodia elata530.590
SRR5643659five period of Gastrodia elata449.740
SRR5643660five period of Gastrodia elata717.630
SRR5643661five period of Gastrodia elata494.150
SRR5643662five period of Gastrodia elata672.430
SRR5643663five period of Gastrodia elata899.420
SRR5643664five period of Gastrodia elata820.450
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1946.690
SRR6049655Rhizomagastrodiae_C368-T10_good_1847.230
SRR6049656Rhizomagastrodiae_C368-T07_good_1753.160
SRR6049657Rhizomagastrodiae_C368-T07_good_11623.800
SRR6049658Rhizomagastrodiae_C368-T04_good_12568.480
SRR6049659Rhizomagastrodiae_C368-T04_good_13329.830
SRR6049660Rhizomagastrodiae_C368-T01_good_11307.430
SRR6049661Rhizomagastrodiae_C368-T04_good_11850.320
SRR6049662Rhizomagastrodiae_C368-T01_good_1440.480
SRR6049663Rhizomagastrodiae_C368-T01_good_1690.110
SRR6049664Rhizomagastrodiae_C368-T10_good_1491.980
SRR6049665Rhizomagastrodiae_C368-T10_good_1491.980
SRP279888GastroGastrodia elata tuber 2,542.68
JuvenJuvenile tuber863.19
Mother_GastroMother tuber of Gastrodia elata 1,650.18
Mother_JuvenMother tuber of Juvenile 2,575.85