Detail information of GWHGAAEX003189/evm.TU.scaffold_130.44


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|720068579|ref|XP_010277152.1|4.83E-19PREDICTED: probable indole-3-acetic acid-amido synthetase GH3.1 [Nelumbo nucifera]
Swissprottr|O81829|GH35_ARATH7.00E-17Indole-3-acetic acid-amido synthetase GH3.5
trEMBLtr|M0SU34|M0SU34_MUSAM1.00E-18Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr4P32720_001}
TAIRAT4G272602.00E-16Auxin-responsive GH3 family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000129908870909391-
Transcript Sequence

Network for GWHGAAEX003189

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module3

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03321.12GH31488.10E-11
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K14487GH3 Plant hormone signal transduction map04075

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms20.950
SRR2545915Juvenile tuber28.680
SRP108465SRR5643513five period of Gastrodia elata3.960
SRR5643514five period of Gastrodia elata10.220
SRR5643515five period of Gastrodia elata7.680
SRR5643524five period of Gastrodia elata12.080
SRR5643525five period of Gastrodia elata3.420
SRR5643528five period of Gastrodia elata1.110
SRR5643658five period of Gastrodia elata7.540
SRR5643659five period of Gastrodia elata18.940
SRR5643660five period of Gastrodia elata22.100
SRR5643661five period of Gastrodia elata13.170
SRR5643662five period of Gastrodia elata13.850
SRR5643663five period of Gastrodia elata40.710
SRR5643664five period of Gastrodia elata27.090
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_19.100
SRR6049655Rhizomagastrodiae_C368-T10_good_10.000
SRR6049656Rhizomagastrodiae_C368-T07_good_12.100
SRR6049657Rhizomagastrodiae_C368-T07_good_14.050
SRR6049658Rhizomagastrodiae_C368-T04_good_14.120
SRR6049659Rhizomagastrodiae_C368-T04_good_11.760
SRR6049660Rhizomagastrodiae_C368-T01_good_12.670
SRR6049661Rhizomagastrodiae_C368-T04_good_13.680
SRR6049662Rhizomagastrodiae_C368-T01_good_10.620
SRR6049663Rhizomagastrodiae_C368-T01_good_10.300
SRR6049664Rhizomagastrodiae_C368-T10_good_13.210
SRR6049665Rhizomagastrodiae_C368-T10_good_13.210
SRP279888GastroGastrodia elata tuber 28.03
JuvenJuvenile tuber3.48
Mother_GastroMother tuber of Gastrodia elata 8.00
Mother_JuvenMother tuber of Juvenile 6.24