Detail information of GWHGAAEX003191/evm.TU.scaffold_130.46


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|291614872|ref|YP_003525029.1|1.00E-16cyclic nucleotide-binding protein [Sideroxydans lithotrophicus ES-1]
KOGKOG06680Casein kinase II, alpha subunit
nrgi|743760949|ref|XP_010939754.1|0PREDICTED: casein kinase II subunit alpha-like [Elaeis guineensis]
Swissprottr|Q08466|CSK22_ARATH0Casein kinase II subunit alpha-2 (Precursor)
trEMBLtr|Q70Z24|Q70Z24_TOBAC0Protein kinase CK2 alpha chain {ECO:0000313|EMBL:CAD27342.1}
TAIRAT3G500000casein kinase II, alpha chain 2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000129917688955563-
Transcript Sequence

Network for GWHGAAEX003191

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.24Pkinase343193.10E-64
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyCMGC_CK2

KEGG pathway

KO Enzyme pathway mapID
K03097CSNK2A Ribosome biogenesis in eukaryotes map03008
Wnt signaling pathwaymap04310
NF-kappa B signaling pathwaymap04064
Mitophagy - animalmap04137
Mitophagy - yeastmap04139
Adherens junctionmap04520
Circadian rhythm - plantmap04712

Gene Ontology

GO term OntologyName
GO:0006468Biological Processprotein phosphorylation
GO:0005524Molecular FunctionATP binding
GO:0004672Molecular Functionprotein kinase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms43.470
SRR2545915Juvenile tuber53.880
SRP108465SRR5643513five period of Gastrodia elata69.640
SRR5643514five period of Gastrodia elata73.210
SRR5643515five period of Gastrodia elata66.300
SRR5643524five period of Gastrodia elata72.420
SRR5643525five period of Gastrodia elata60.330
SRR5643528five period of Gastrodia elata63.820
SRR5643658five period of Gastrodia elata52.660
SRR5643659five period of Gastrodia elata62.380
SRR5643660five period of Gastrodia elata55.550
SRR5643661five period of Gastrodia elata49.640
SRR5643662five period of Gastrodia elata46.870
SRR5643663five period of Gastrodia elata51.940
SRR5643664five period of Gastrodia elata45.680
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_147.950
SRR6049655Rhizomagastrodiae_C368-T10_good_170.140
SRR6049656Rhizomagastrodiae_C368-T07_good_150.930
SRR6049657Rhizomagastrodiae_C368-T07_good_147.500
SRR6049658Rhizomagastrodiae_C368-T04_good_145.240
SRR6049659Rhizomagastrodiae_C368-T04_good_147.730
SRR6049660Rhizomagastrodiae_C368-T01_good_141.940
SRR6049661Rhizomagastrodiae_C368-T04_good_141.590
SRR6049662Rhizomagastrodiae_C368-T01_good_159.170
SRR6049663Rhizomagastrodiae_C368-T01_good_152.750
SRR6049664Rhizomagastrodiae_C368-T10_good_176.880
SRR6049665Rhizomagastrodiae_C368-T10_good_176.880
SRP279888GastroGastrodia elata tuber 41.92
JuvenJuvenile tuber90.89
Mother_GastroMother tuber of Gastrodia elata 58.43
Mother_JuvenMother tuber of Juvenile 79.30