Gene detail

Detail information of GWHGAAEX003196/evm.TU.scaffold_130.52_evm.TU.scaffold_130.53

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG4501	3.00E-120	Transcription coactivator complex, P100 component
nr	gi\|672171253\|ref\|XP_008805692.1\|	0	PREDICTED: activating signal cointegrator 1 complex subunit 2 [Phoenix dactylifera]
trEMBL	tr\|M0SJ24\|M0SJ24_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr3P30080_001}
TAIR	AT1G27750_2	3.00E-120	Unannotated protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000129	1127523	1138991	-

Transcript Sequence
>GWHTAAEX003196 ATGTCCATGCAGCCACAAAGATCTCGTGGCCCGAAGGGACCTCACCGTCCTCAAGCAAGATACATACCCAAAACCGATATCGTCTCCAGCAGCGATCTACCCGCCTCTGGCGACAGGAAGGTCGCACCGCCTTTCACAACATCACTGAGGGAGAGTGCCGCTGAGAAACCTCAGCCAGTGAATAAAGGTGATCGCGGCATTGGAGGAAGCTGTTTCGTAAGGTATTTGCCTCAAGACGAGGCAGTTGCATCAGGCCTCGGAGCCGATGCTGGTGGATCGGATGCCACAGAATCGCAGGCGGTTGTTGATTTTCTCAACGAAGAGCTGTCTCGTCTTCTTAAGATGAAACCTAGAGATTTCTGGAACGAAGTGGCGAAGAACGATTCGTTGCATCAATTTATAGACAGTTACTTGCAGTTCAGGAGCAGATGGTATGATTTTCCGCACCGTGGCTCCAGGGGATTGGTTGCTGGAGTTATTGTCGGAGAGGCTGATTTATGCCGTCGTGTATTTTTGGTCCTCTATCGGATATCATCTAATAGAGATCCTGGGGTTCACGCCAGTGATTGTCTCAGTGCAAAAGATCACACAGCTCTTTTACAGGAAAATAAGCTACTCAACCTACCAAAGTTATTGGATATCTGTGCCATCTATGGACATGAAAATGGGGAGTTAGCCAAATCACTGGTTGAAAATGCCATAAAAGCTCTGCCGCAATTTCTAGACAACTGTGGGGCTGTGGTATCCCATTTTCTTAGCATAGTTCACACAATGCATGAGCGCTGCAACACATCTTTAGAGGCACTGTCTTTCAGTGAAGGCAAAGGAAGTCAGCTGTTCCTGCAGCTGTCCAATGATTTTTTGGAGGTAATGGATTTCATAAATGATTCGGTCACGACGTTGGACGCCTTTGCCGAGGCATATAAACCCGCAGCTTTGCATTTCTCTGCTTCGTTTGAAACAAGCTATGGAAACGATGATCTGCTGAACAGCCTTGCTAGGCTGCACGACGCATTAATCCCATCCATGCTGCGTGGATTGTCGTCCCTTGCTCCTAATGCACCGAGCTTCCAGGTACTGTCGGGGAGGATGGTCGGCTTGGGTTGGAAGCTTCTGAACTTCTGCTATCTGAACTACGAGATTTCCGCCGACGATCTTCTTCTTTTTCCGGCCGTTTCCAAACTGTTTCCGGCAAGCGTCGCGGATCCGTCCTTAAGAGGCGACATCTTGGTCCAAACGCTGAAGGAGATCAGTGGGGATCACGGGACTTTTGCTGAGAAAATCGAAATGAACTTCGGAGTGTTCAACAGAATCAGCAGCCTCTGCAGACAAGGGTGGATTTCGTTGGATGATGAGCAGCTGCAGTACCTGTCTCAAACTCTTAAACCATCTTCTTCGCCGGCGGATGAAGGGGCGGTGTTTCTGGATTCAAAAATCAGCCAGATAAAAGATCTGTTTCCGGACTACGGGAGGGGCTTTCTCCGCTCCTGCCTCGAAGCCTATGGCCAGGACCCGGAAGAGGTGATTGGAAGAATACTGGAAGGAACCCTGCGCAAGGACCTTCTGTCCCTCGATTCTTCCACGGAGCAGATCCAACCGTCCGATCCGATCTCCCGCAAAGGAAAATCGATCTTGATCGAGGAGGAGCCTTCGCAGCATGATCTTCAAAGACGCTGGGATGATGGCGGCAGCAGGGGGAGGTACATCAGAAAGCAGAAGGGCGACAGCGATGATGCCCTAATGGACTCCAGATCTGCGAAAGACGCTGTGAGATCGTCGGTCTTGGCGGCGGCGGCGGCATTCGAGTACGAGGACGAGTATGATGATTCGTTCGACGATTTGGGGCTGGGCGTGGGGGAGTCCGGATTTGAGGAATCAGATGACGTGGCTGAAGATGGTGATAGGGGATGGGATTCGAAGGAGAAGGAGAAGCTGCCGCAATTCTTTGTGAAGGATGGGAAGAATTACAGTTACAGGATTGCTGGCTCTGTGGCTGTGTCAAGCGCCGGAGAAGCGGCCGCGTGGCATCGAACTCAGAAGGAGCTGATTCATGGCCTTGGCCTCGGGGGGAATCGGGCTCTCGAGGCCATCAAAATCAGGGGGGATTCTTACACGGGCGGTGATGATGAAGGTGACGATGACCTGCCGCAACAGGTCGCTGGCTCAGCGGAATATTCCGGGAGAGGGAGCCCTGGGTTTCGAGCAAGGGGAGGGAGGCGAGGCGGCGGCCGAAATTATAGGAAGGATAGGGCCATGAAGAAGCATTTTTCAGGCCTGACCGGTTCTTGATTTCCTCCTATGTTTTTGCAACTTTTGGCTCCTGTTGCTTTTATTGGAATCAACCTACGAAGGATTCGGAGGAATTCCAACCTTTACATATGCAGGCTTTTCTGTTTTGTAATACTACATTCCATTCCAGATGAGTATCCTCAAAAGAGTCATAAGTTTTAATTCTTAACTTTTATTTGTTTATGCTTTGTTGTTGTATCTTCAGTTTTGAGTCATCTTTTGTAATTATTCTTGATTTTCCTATTACAGTCATTACTGCTTTTTAGAATATTAATTATATTGGTAATATTTAAATGTTATTCTCGCAGCACTTTAATCTTTAAAAA

Network for GWHGAAEX003196

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF02845.15	CUE	476	516	4.70E-10

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0005515	Molecular Function	protein binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	11.510
SRP064423	SRR2545915	Juvenile tuber	11.620
SRP108465	SRR5643513	five period of Gastrodia elata	22.010
	SRR5643514	five period of Gastrodia elata	24.260
	SRR5643515	five period of Gastrodia elata	23.140
	SRR5643524	five period of Gastrodia elata	25.020
	SRR5643525	five period of Gastrodia elata	31.570
	SRR5643528	five period of Gastrodia elata	29.580
	SRR5643658	five period of Gastrodia elata	25.460
	SRR5643659	five period of Gastrodia elata	25.160
	SRR5643660	five period of Gastrodia elata	27.050
	SRR5643661	five period of Gastrodia elata	24.020
	SRR5643662	five period of Gastrodia elata	25.670
	SRR5643663	five period of Gastrodia elata	25.650
	SRR5643664	five period of Gastrodia elata	30.560
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	18.720
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	12.430
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	20.220
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	18.090
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	22.250
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	24.010
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	19.830
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	20.470
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	20.680
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	23.000
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	22.340
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	22.340
SRP279888	Gastro	Gastrodia elata tuber	32.20
	Juven	Juvenile tuber	32.89
	Mother_Gastro	Mother tuber of Gastrodia elata	41.88
	Mother_Juven	Mother tuber of Juvenile	40.99