Gene detail

Detail information of GWHGAAEX003209/evm.TU.scaffold_130.70

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|595830498\|ref\|XP_007206085.1\|	8.42E-18	hypothetical protein PRUPE_ppa012904mg [Prunus persica]
trEMBL	tr\|M5W0P0\|M5W0P0_PRUPE	3.00E-18	Uncharacterized protein {ECO:0000313\|EMBL:EMJ07284.1}
TAIR	AT2G32190	8.00E-09	Unannotated protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000129	1423830	1426632	+

Transcript Sequence
>GWHTAAEX003209 ATGCCTTCCAACGGGGCGGATTCTCCAAGCTGGGACAAGAGAATCAATCGATCATCTCTCCTTCAGCTGCGCCTGATTTTCCTCTCCGCCGCTCTCCGTCACGACGAGATCGAGATGAGTTACAACAATCAGCCGCCGCCTGTTGGAGTTCCTCCGCCGCAAGGTTATCCTTACGGGTACGAGAAGGACGCTTATCCTCCGCCGGGCTATCCAGCTCAGGGTTATCCGGCCGGCGGCTACCCGCCGCCAGGAGGTTATCCGCCGCCGGGGGCTTATCCGCCTCCGCAGTACGCACAGCAGCCCCCGCCTCGGCAGCAGAGCAGCGGACCCAGTTTCATGGAGGGATGCTTGGCCGCGCTGTGCTGTTGCTGCCTTCTGGAGGCGTGCTTCTGAAGAGGAGAATATTTATATAAAGAAGGAAGGATTGGCAGCGGCGGATGTTGGTTCGTTCAATCGCCTTCCAGATTCCCGTCAGTGGATTCTATTCTCTTCTGCATTATCAGTGCTTTATACGGCAAAGCGCAAGGCATTTGTTAGGTGTTGTAATGGCTGCCTGCTCCGTTTTTTCTCCGATGCTTGTTGTTTTCTTCTAATCATTTGTTAATGACTCACTCGTTTAAAATTTATGTTTTATTTCTAAAATATTTTCATATATTTGATTGGTTAGCTGTGTTCGGATCCTTTAAGCGCTCGTTCCTATTGGATTAGATACGATTGTTGATATTCTTTGAATTGCTCGGCAAAGCGTTTAATGAACTCTGATCGTTGTGATGCTTTTTTATTTGTTGCCTCCATTAATTTTTCAACTTCTCTTTTAAATTTATGGTGATGCAATTGCTTGTTGCGCTTTTGTGCAGCTGTTTAACTACTGCTGAACTGCGAACGGCTAAGAGGTAAAGCTTTACATTTTATCTGCCGCATATTAATCTTATCTGTTTCTTTCAAAATTGCTAAACTTATAATTCAGTGCTAGATTAATGCTTACCCACAATTTGAAAATAAAAATTTGTCCAAATAAGATAATTAGTGATCAGAAATAAAATAAAAACTTCATACATATCATAGAAGTTCTTGTTTTTAGGGACAGTTCAATAGTGTAGGTTTACGCAAGGAATCTCGAAATAATGCTCTGCTTTACGCAAGAATGTTCTACCCATACGCAAGGAATCTTCAAAACGGAGCCTCTTTAGTGCAACTGCTCATGATCTAGATAAATGCTTATTTGATTTTATTACTACAAGATATAGTATTGATAATCAGACCATCCACTTAGCGGCTATTGATCTCTCTAATGCATTGGTAAAGAAGAGTATAGCGATCTCTGGTAAGCCTCATTACCAACTGCCACAGCCATTAATGCACAGTTCGCTGATCTACCACTGTGGACCATATATCAAGATAAAGACTCGCAACCAAAGCCTTGAACGAATTTCAGGGCTTATGCCCAAATGCATTCCAAAAAGGGTGTAGTCTTGCAGATGCAATCACAAACTTAAGTAAAAGGAAATAAAAATTAGCAAAAACAAGCAACAAATAGGGAAGAAAACAGTAGAAAGATCAACAGCTGCTTTAGAACGAGAATAAATATAGTAAGCTGTGGCTGAGGCTTGAACGGGGCTTCCCGCAGGTGATCAAAGAGAACCTATTTCTAACTGATATGAAGTTTAATTCAGAGACGTATATAGAGAATATATCTATGAATGGCAATAAAAAAAGCATTTATCTGCACCGACTAGGAGGAACACGAATAATCAGAAACCTCAGTTTGAAGGAAGGAAGAAAATATATTCATAGTGTAGAGCAGGAGGGTATTTATATCGGTTCTCTCTCTGAGCTCAAGAATCTCTCGATATTCAGGATGGATAACATTGAGGCGGTGTCAATCCCTGTTTAGAGTATCTAAGAATCGAGTGCCTAGTCTTCGTCATTGCTCTTTCTAGCTACCTCATTTGTTCAGCATTTTAAGCACTTGATTCATTAATGTAATTGTATAGTAAAACCCATTTTTCTTAAGTTATATGCTATTTTTAGCAATGAATGAATGCGCATCCATAAATTTAAGCTTAAAATAATGTTTGTGCCAAACCCAAGGATAAGAGCCAATCAGATACTGAAATTCATCTCAGATCTATTCTTGAAACTCTCAAATCTCGTCAGCTTTCAAATCAGTTCCATTATTGGGGCATGTTGTTGATGCTCAAGAAATCAGATTGAGTATTTTTCTTAATTCATTAGCTCAAAAAACACAGAAGTTTCTTTTTTTAATTTTAGCATTATCAATTCAATTGCTTATGTATCACAAGAGATAGGAAAAATTGTTCGTTAAAGAACATATCTCTAAAAAAAATTCACAAATAATTTTAAAAAAATACAATTTTTTTTCTCACAAAAAAATAAAAATAAAATCTACTTGTACACATACGAACGTTAGGC

Network for GWHGAAEX003209

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module4

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF12734.6	CYSTM	92	130	5.00E-08

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	67.350
SRP064423	SRR2545915	Juvenile tuber	71.350
SRP108465	SRR5643513	five period of Gastrodia elata	65.530
	SRR5643514	five period of Gastrodia elata	72.430
	SRR5643515	five period of Gastrodia elata	118.860
	SRR5643524	five period of Gastrodia elata	77.780
	SRR5643525	five period of Gastrodia elata	226.420
	SRR5643528	five period of Gastrodia elata	218.480
	SRR5643658	five period of Gastrodia elata	147.380
	SRR5643659	five period of Gastrodia elata	75.260
	SRR5643660	five period of Gastrodia elata	58.220
	SRR5643661	five period of Gastrodia elata	82.270
	SRR5643662	five period of Gastrodia elata	105.050
	SRR5643663	five period of Gastrodia elata	77.370
	SRR5643664	five period of Gastrodia elata	270.750
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	112.260
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	107.210
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	96.450
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	94.090
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	94.500
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	89.130
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	117.060
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	88.490
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	84.590
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	118.780
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	127.300
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	127.300
SRP279888	Gastro	Gastrodia elata tuber	108.59
	Juven	Juvenile tuber	59.28
	Mother_Gastro	Mother tuber of Gastrodia elata	421.14
	Mother_Juven	Mother tuber of Juvenile	331.35