Detail information of GWHGAAEX003220/evm.TU.scaffold_130.82


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743847141|ref|XP_010939026.1|1.82E-159PREDICTED: UPF0496 protein 1-like [Elaeis guineensis]
Swissprottr|Q10QE9|U496A_ORYSJ1.00E-145UPF0496 protein 1
trEMBLtr|M0UQZ2|M0UQZ2_HORVD4.00E-148Uncharacterized protein {ECO:0000313|EnsemblPlants:MLOC_13295.1, ECO:0000313|EnsemblPlants:MLOC_13295.2}
TAIRAT4G343201.00E-131Protein of unknown function (DUF677)

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000012916435701645385-
Transcript Sequence

Network for GWHGAAEX003220

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF05055.11DUF677443741.10E-113
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms21.190
SRR2545915Juvenile tuber35.200
SRP108465SRR5643513five period of Gastrodia elata17.840
SRR5643514five period of Gastrodia elata16.140
SRR5643515five period of Gastrodia elata23.100
SRR5643524five period of Gastrodia elata18.970
SRR5643525five period of Gastrodia elata13.180
SRR5643528five period of Gastrodia elata11.520
SRR5643658five period of Gastrodia elata8.010
SRR5643659five period of Gastrodia elata18.310
SRR5643660five period of Gastrodia elata15.690
SRR5643661five period of Gastrodia elata18.140
SRR5643662five period of Gastrodia elata16.950
SRR5643663five period of Gastrodia elata16.870
SRR5643664five period of Gastrodia elata16.600
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_123.050
SRR6049655Rhizomagastrodiae_C368-T10_good_115.660
SRR6049656Rhizomagastrodiae_C368-T07_good_124.630
SRR6049657Rhizomagastrodiae_C368-T07_good_119.930
SRR6049658Rhizomagastrodiae_C368-T04_good_123.220
SRR6049659Rhizomagastrodiae_C368-T04_good_125.070
SRR6049660Rhizomagastrodiae_C368-T01_good_124.540
SRR6049661Rhizomagastrodiae_C368-T04_good_128.110
SRR6049662Rhizomagastrodiae_C368-T01_good_129.860
SRR6049663Rhizomagastrodiae_C368-T01_good_129.230
SRR6049664Rhizomagastrodiae_C368-T10_good_118.820
SRR6049665Rhizomagastrodiae_C368-T10_good_118.820
SRP279888GastroGastrodia elata tuber 27.17
JuvenJuvenile tuber17.44
Mother_GastroMother tuber of Gastrodia elata 22.60
Mother_JuvenMother tuber of Juvenile 15.55