Detail information of GWHGAAEX003221/evm.TU.scaffold_130.83


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672172224|ref|XP_008806198.1|3.68E-43PREDICTED: NAC transcription factor 25-like isoform X6 [Phoenix dactylifera]
Swissprottr|Q52QH4|NAC68_ORYSJ3.00E-12NAC domain-containing protein 68
trEMBLtr|M0TKU1|M0TKU1_MUSAM4.00E-41Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr7P26050_001}
TAIRAT1G774502.00E-13NAC domain containing protein 32

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000012916457221653390-
Transcript Sequence

Network for GWHGAAEX003221

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02365.14NAM311392.80E-09
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyNAC

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms8.900
SRR2545915Juvenile tuber18.170
SRP108465SRR5643513five period of Gastrodia elata13.240
SRR5643514five period of Gastrodia elata11.030
SRR5643515five period of Gastrodia elata13.980
SRR5643524five period of Gastrodia elata10.310
SRR5643525five period of Gastrodia elata5.410
SRR5643528five period of Gastrodia elata3.380
SRR5643658five period of Gastrodia elata3.420
SRR5643659five period of Gastrodia elata20.800
SRR5643660five period of Gastrodia elata15.970
SRR5643661five period of Gastrodia elata20.460
SRR5643662five period of Gastrodia elata17.060
SRR5643663five period of Gastrodia elata9.870
SRR5643664five period of Gastrodia elata14.570
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_16.690
SRR6049655Rhizomagastrodiae_C368-T10_good_11.840
SRR6049656Rhizomagastrodiae_C368-T07_good_15.320
SRR6049657Rhizomagastrodiae_C368-T07_good_15.050
SRR6049658Rhizomagastrodiae_C368-T04_good_14.720
SRR6049659Rhizomagastrodiae_C368-T04_good_15.240
SRR6049660Rhizomagastrodiae_C368-T01_good_15.710
SRR6049661Rhizomagastrodiae_C368-T04_good_13.800
SRR6049662Rhizomagastrodiae_C368-T01_good_16.290
SRR6049663Rhizomagastrodiae_C368-T01_good_15.110
SRR6049664Rhizomagastrodiae_C368-T10_good_18.630
SRR6049665Rhizomagastrodiae_C368-T10_good_18.630
SRP279888GastroGastrodia elata tuber 9.88
JuvenJuvenile tuber10.53
Mother_GastroMother tuber of Gastrodia elata 17.05
Mother_JuvenMother tuber of Juvenile 8.66