Detail information of GWHGAAEX003224/evm.TU.scaffold_130.88


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG17211.00E-124FOG: Zn-finger
nrgi|672196662|ref|XP_008776861.1|2.58E-137PREDICTED: zinc finger protein NUTCRACKER-like isoform X1 [Phoenix dactylifera]
Swissprottr|Q9LVQ7|IDD1_ARATH3.00E-125Protein indeterminate-domain 1 {ECO:0000303|PubMed:16784536}
trEMBLtr|A0A061FDF7|A0A061FDF7_THECC1.00E-132C2H2-like zinc finger protein {ECO:0000313|EMBL:EOY14712.1}
TAIRAT5G667301.00E-124C2H2-like zinc finger protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000012917838401786253+
Transcript Sequence

Network for GWHGAAEX003224

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00096.25zf-C2H244660.004
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyC2H2

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003676Molecular Functionnucleic acid binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms55.740
SRR2545915Juvenile tuber61.190
SRP108465SRR5643513five period of Gastrodia elata69.770
SRR5643514five period of Gastrodia elata56.160
SRR5643515five period of Gastrodia elata67.040
SRR5643524five period of Gastrodia elata56.360
SRR5643525five period of Gastrodia elata116.890
SRR5643528five period of Gastrodia elata74.230
SRR5643658five period of Gastrodia elata132.890
SRR5643659five period of Gastrodia elata68.200
SRR5643660five period of Gastrodia elata67.790
SRR5643661five period of Gastrodia elata75.240
SRR5643662five period of Gastrodia elata84.550
SRR5643663five period of Gastrodia elata68.170
SRR5643664five period of Gastrodia elata113.340
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_195.270
SRR6049655Rhizomagastrodiae_C368-T10_good_155.970
SRR6049656Rhizomagastrodiae_C368-T07_good_171.510
SRR6049657Rhizomagastrodiae_C368-T07_good_1110.090
SRR6049658Rhizomagastrodiae_C368-T04_good_1122.740
SRR6049659Rhizomagastrodiae_C368-T04_good_1140.270
SRR6049660Rhizomagastrodiae_C368-T01_good_199.640
SRR6049661Rhizomagastrodiae_C368-T04_good_197.050
SRR6049662Rhizomagastrodiae_C368-T01_good_151.190
SRR6049663Rhizomagastrodiae_C368-T01_good_164.510
SRR6049664Rhizomagastrodiae_C368-T10_good_150.330
SRR6049665Rhizomagastrodiae_C368-T10_good_150.330
SRP279888GastroGastrodia elata tuber 74.75
JuvenJuvenile tuber98.33
Mother_GastroMother tuber of Gastrodia elata 175.59
Mother_JuvenMother tuber of Juvenile 200.19