Detail information of GWHGAAEX003238/evm.TU.scaffold_130.104
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|374333655|ref|YP_005086783.1| | 2.00E-35 | Flavin-containing amine oxidase domain-containing protein 1 [Pseudovibrio sp. FO-BEG1] |
| KOG | KOG0029 | 5.00E-107 | Amine oxidase |
| nr | gi|695037095|ref|XP_009406028.1| | 0 | PREDICTED: polyamine oxidase-like [Musa acuminata subsp. malaccensis] |
| Swissprot | tr|O64411|PAO_MAIZE | 1.00E-165 | Polyamine oxidase (Precursor) |
| trEMBL | tr|D7TDE4|D7TDE4_VITVI | 4.00E-172 | Putative uncharacterized protein {ECO:0000313|EMBL:CBI28517.3} |
| TAIR | AT5G13700 | 5.00E-107 | polyamine oxidase 1 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000129 | 2005325 | 2007983 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX003238
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF01593.23 | Amino_oxidase | 11 | 292 | 2.00E-56 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K13366 | MPAO, PAO1 | Metabolic pathways | map01100 |
| Arginine and proline metabolism | map00330 | ||
| beta-Alanine metabolism | map00410 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0055114 | Biological Process | oxidation-reduction process |
| GO:0016491 | Molecular Function | oxidoreductase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 6.680 |
| SRR2545915 | Juvenile tuber | 6.790 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 0.470 |
| SRR5643514 | five period of Gastrodia elata | 0.300 | |
| SRR5643515 | five period of Gastrodia elata | 0.250 | |
| SRR5643524 | five period of Gastrodia elata | 0.280 | |
| SRR5643525 | five period of Gastrodia elata | 0.070 | |
| SRR5643528 | five period of Gastrodia elata | 0.140 | |
| SRR5643658 | five period of Gastrodia elata | 0.050 | |
| SRR5643659 | five period of Gastrodia elata | 8.430 | |
| SRR5643660 | five period of Gastrodia elata | 9.610 | |
| SRR5643661 | five period of Gastrodia elata | 9.290 | |
| SRR5643662 | five period of Gastrodia elata | 11.830 | |
| SRR5643663 | five period of Gastrodia elata | 2.700 | |
| SRR5643664 | five period of Gastrodia elata | 10.360 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 12.030 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 12.700 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 7.980 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 7.640 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 17.590 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 19.140 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 9.050 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 11.130 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 4.560 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 12.530 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 22.330 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 22.330 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 14.73 |
| Juven | Juvenile tuber | 7.05 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 0.69 | |
| Mother_Juven | Mother tuber of Juvenile | 1.62 |