Detail information of GWHGAAEX003258/evm.TU.scaffold_130.126


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG12858.00E-15Beta, beta-carotene 15,15'-dioxygenase and related enzymes
nrgi|672164168|ref|XP_008801952.1|5.62E-18PREDICTED: carotenoid 9,10(9',10')-cleavage dioxygenase [Phoenix dactylifera]
Swissprottr|Q84KG5|CCD_CROSA1.00E-16Carotenoid 9,10(9',10')-cleavage dioxygenase
trEMBLtr|M0SIZ3|M0SIZ3_MUSAM6.00E-17Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr3P29770_001}
TAIRAT3G635208.00E-15carotenoid cleavage dioxygenase 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000012923745512377255-
Transcript Sequence

Network for GWHGAAEX003258

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.000
SRR2545915Juvenile tuber0.000
SRP108465SRR5643513five period of Gastrodia elata2.930
SRR5643514five period of Gastrodia elata10.980
SRR5643515five period of Gastrodia elata5.860
SRR5643524five period of Gastrodia elata4.990
SRR5643525five period of Gastrodia elata0.000
SRR5643528five period of Gastrodia elata0.000
SRR5643658five period of Gastrodia elata0.000
SRR5643659five period of Gastrodia elata0.380
SRR5643660five period of Gastrodia elata0.430
SRR5643661five period of Gastrodia elata0.000
SRR5643662five period of Gastrodia elata0.000
SRR5643663five period of Gastrodia elata0.000
SRR5643664five period of Gastrodia elata0.000
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_132.350
SRR6049655Rhizomagastrodiae_C368-T10_good_150.450
SRR6049656Rhizomagastrodiae_C368-T07_good_152.950
SRR6049657Rhizomagastrodiae_C368-T07_good_120.180
SRR6049658Rhizomagastrodiae_C368-T04_good_143.450
SRR6049659Rhizomagastrodiae_C368-T04_good_149.720
SRR6049660Rhizomagastrodiae_C368-T01_good_116.900
SRR6049661Rhizomagastrodiae_C368-T04_good_122.480
SRR6049662Rhizomagastrodiae_C368-T01_good_163.000
SRR6049663Rhizomagastrodiae_C368-T01_good_180.480
SRR6049664Rhizomagastrodiae_C368-T10_good_176.980
SRR6049665Rhizomagastrodiae_C368-T10_good_176.980
SRP279888GastroGastrodia elata tuber 1.93
JuvenJuvenile tuber4.06
Mother_GastroMother tuber of Gastrodia elata 2.85
Mother_JuvenMother tuber of Juvenile 3.13