Detail information of GWHGAAEX003260/evm.TU.scaffold_130.129


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG12930Proteins containing armadillo/beta-catenin-like repeat
nrgi|672112196|ref|XP_008804523.1|0PREDICTED: armadillo repeat-containing protein 8 isoform X1 [Phoenix dactylifera]
trEMBLtr|D7SL42|D7SL42_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CBI16370.3}
TAIRAT1G513500ARM repeat superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000012924230762460160+
Transcript Sequence

Network for GWHGAAEX003260

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00514.22Arm3994260.00023
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms35.880
SRR2545915Juvenile tuber47.270
SRP108465SRR5643513five period of Gastrodia elata25.000
SRR5643514five period of Gastrodia elata29.500
SRR5643515five period of Gastrodia elata24.900
SRR5643524five period of Gastrodia elata27.030
SRR5643525five period of Gastrodia elata14.780
SRR5643528five period of Gastrodia elata16.310
SRR5643658five period of Gastrodia elata15.730
SRR5643659five period of Gastrodia elata25.320
SRR5643660five period of Gastrodia elata29.630
SRR5643661five period of Gastrodia elata29.700
SRR5643662five period of Gastrodia elata29.660
SRR5643663five period of Gastrodia elata30.170
SRR5643664five period of Gastrodia elata27.250
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_133.190
SRR6049655Rhizomagastrodiae_C368-T10_good_126.310
SRR6049656Rhizomagastrodiae_C368-T07_good_131.150
SRR6049657Rhizomagastrodiae_C368-T07_good_132.380
SRR6049658Rhizomagastrodiae_C368-T04_good_132.070
SRR6049659Rhizomagastrodiae_C368-T04_good_138.920
SRR6049660Rhizomagastrodiae_C368-T01_good_129.660
SRR6049661Rhizomagastrodiae_C368-T04_good_131.770
SRR6049662Rhizomagastrodiae_C368-T01_good_126.530
SRR6049663Rhizomagastrodiae_C368-T01_good_129.790
SRR6049664Rhizomagastrodiae_C368-T10_good_133.710
SRR6049665Rhizomagastrodiae_C368-T10_good_133.710
SRP279888GastroGastrodia elata tuber 33.47
JuvenJuvenile tuber26.88
Mother_GastroMother tuber of Gastrodia elata 31.56
Mother_JuvenMother tuber of Juvenile 26.65