Detail information of GWHGAAEX003261/evm.TU.scaffold_130.130


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|374987560|ref|YP_004963055.1|3.00E-29serine/threonine protein kinase [Streptomyces bingchenggensis BCW-1]
KOGKOG00320Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily
nrgi|472178208|gb|AGI21023.1|0calcium-dependent protein kinase 3 [Dendrobium catenatum]
Swissprottr|Q42438|CDPK8_ARATH0Calcium-dependent protein kinase 8
trEMBLtr|W8CMD4|W8CMD4_9ASPA0Calcium-dependent protein kinase 3 {ECO:0000313|EMBL:AGI21023.1}
TAIRAT5G194500calcium-dependent protein kinase 19

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000012924662612472565-
Transcript Sequence

Network for GWHGAAEX003261

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.24Pkinase603184.30E-76
PF13499.5EF-hand_73654251.30E-08
PF13499.5EF-hand_74385013.00E-13
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyCAMK_CDPK

KEGG pathway

KO Enzyme pathway mapID
K13412CPK Plant-pathogen interaction map04626

Gene Ontology

GO term OntologyName
GO:0006468Biological Processprotein phosphorylation
GO:0004672Molecular Functionprotein kinase activity
GO:0005509Molecular Functioncalcium ion binding
GO:0005524Molecular FunctionATP binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms26.380
SRR2545915Juvenile tuber67.140
SRP108465SRR5643513five period of Gastrodia elata21.630
SRR5643514five period of Gastrodia elata16.430
SRR5643515five period of Gastrodia elata26.890
SRR5643524five period of Gastrodia elata13.700
SRR5643525five period of Gastrodia elata27.930
SRR5643528five period of Gastrodia elata35.820
SRR5643658five period of Gastrodia elata28.160
SRR5643659five period of Gastrodia elata43.820
SRR5643660five period of Gastrodia elata30.960
SRR5643661five period of Gastrodia elata36.880
SRR5643662five period of Gastrodia elata33.580
SRR5643663five period of Gastrodia elata29.900
SRR5643664five period of Gastrodia elata35.410
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_135.650
SRR6049655Rhizomagastrodiae_C368-T10_good_127.110
SRR6049656Rhizomagastrodiae_C368-T07_good_130.670
SRR6049657Rhizomagastrodiae_C368-T07_good_129.170
SRR6049658Rhizomagastrodiae_C368-T04_good_115.990
SRR6049659Rhizomagastrodiae_C368-T04_good_114.890
SRR6049660Rhizomagastrodiae_C368-T01_good_132.410
SRR6049661Rhizomagastrodiae_C368-T04_good_120.460
SRR6049662Rhizomagastrodiae_C368-T01_good_127.560
SRR6049663Rhizomagastrodiae_C368-T01_good_128.950
SRR6049664Rhizomagastrodiae_C368-T10_good_128.670
SRR6049665Rhizomagastrodiae_C368-T10_good_128.670
SRP279888GastroGastrodia elata tuber 18.23
JuvenJuvenile tuber18.19
Mother_GastroMother tuber of Gastrodia elata 57.74
Mother_JuvenMother tuber of Juvenile 43.82