Detail information of GWHGAAEX003271/evm.TU.scaffold_130.140


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG17454.00E-93Histones H3 and H4
nrgi|351722020|ref|NP_001238509.1|6.71E-92uncharacterized protein LOC100306416 [Glycine max]
Swissprottr|P68428|H32_WHEAT3.00E-94Histone H3.2
trEMBLtr|W5A3T1|W5A3T1_WHEAT2.00E-92Histone H3 {ECO:0000256|RuleBase:RU004471} (Fragment)
TAIRAT5G653604.00E-93Histone superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000012927576952758529+
Transcript Sequence

Network for GWHGAAEX003271

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00125.23Histone11327.00E-54
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0046982Molecular Functionprotein heterodimerization activity
GO:0003677Molecular FunctionDNA binding
GO:0000786Cellular Componentnucleosome

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms7.570
SRR2545915Juvenile tuber19.810
SRP108465SRR5643513five period of Gastrodia elata121.510
SRR5643514five period of Gastrodia elata184.920
SRR5643515five period of Gastrodia elata106.450
SRR5643524five period of Gastrodia elata131.540
SRR5643525five period of Gastrodia elata4.590
SRR5643528five period of Gastrodia elata4.630
SRR5643658five period of Gastrodia elata2.790
SRR5643659five period of Gastrodia elata12.090
SRR5643660five period of Gastrodia elata14.550
SRR5643661five period of Gastrodia elata18.600
SRR5643662five period of Gastrodia elata9.210
SRR5643663five period of Gastrodia elata15.410
SRR5643664five period of Gastrodia elata3.210
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1110.400
SRR6049655Rhizomagastrodiae_C368-T10_good_1193.180
SRR6049656Rhizomagastrodiae_C368-T07_good_1235.150
SRR6049657Rhizomagastrodiae_C368-T07_good_1100.710
SRR6049658Rhizomagastrodiae_C368-T04_good_180.990
SRR6049659Rhizomagastrodiae_C368-T04_good_140.270
SRR6049660Rhizomagastrodiae_C368-T01_good_1134.250
SRR6049661Rhizomagastrodiae_C368-T04_good_1124.910
SRR6049662Rhizomagastrodiae_C368-T01_good_1253.090
SRR6049663Rhizomagastrodiae_C368-T01_good_1159.330
SRR6049664Rhizomagastrodiae_C368-T10_good_1291.080
SRR6049665Rhizomagastrodiae_C368-T10_good_1291.080
SRP279888GastroGastrodia elata tuber 7.22
JuvenJuvenile tuber17.92
Mother_GastroMother tuber of Gastrodia elata 4.19
Mother_JuvenMother tuber of Juvenile 0.90