Detail information of GWHGAAEX003274/evm.TU.scaffold_130.143


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG17454.00E-93Histones H3 and H4
nrgi|351722020|ref|NP_001238509.1|6.71E-92uncharacterized protein LOC100306416 [Glycine max]
Swissprottr|P68428|H32_WHEAT3.00E-94Histone H3.2
trEMBLtr|W5A3T1|W5A3T1_WHEAT2.00E-92Histone H3 {ECO:0000256|RuleBase:RU004471} (Fragment)
TAIRAT5G653604.00E-93Histone superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000012927968962797571+
Transcript Sequence

Network for GWHGAAEX003274

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00125.23Histone11327.00E-54
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0046982Molecular Functionprotein heterodimerization activity
GO:0003677Molecular FunctionDNA binding
GO:0000786Cellular Componentnucleosome

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms1.130
SRR2545915Juvenile tuber5.400
SRP108465SRR5643513five period of Gastrodia elata20.530
SRR5643514five period of Gastrodia elata22.690
SRR5643515five period of Gastrodia elata10.780
SRR5643524five period of Gastrodia elata14.420
SRR5643525five period of Gastrodia elata2.550
SRR5643528five period of Gastrodia elata1.250
SRR5643658five period of Gastrodia elata1.540
SRR5643659five period of Gastrodia elata4.260
SRR5643660five period of Gastrodia elata3.570
SRR5643661five period of Gastrodia elata2.090
SRR5643662five period of Gastrodia elata2.360
SRR5643663five period of Gastrodia elata5.880
SRR5643664five period of Gastrodia elata0.770
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_128.580
SRR6049655Rhizomagastrodiae_C368-T10_good_131.750
SRR6049656Rhizomagastrodiae_C368-T07_good_147.760
SRR6049657Rhizomagastrodiae_C368-T07_good_119.930
SRR6049658Rhizomagastrodiae_C368-T04_good_120.940
SRR6049659Rhizomagastrodiae_C368-T04_good_113.470
SRR6049660Rhizomagastrodiae_C368-T01_good_121.670
SRR6049661Rhizomagastrodiae_C368-T04_good_126.610
SRR6049662Rhizomagastrodiae_C368-T01_good_146.200
SRR6049663Rhizomagastrodiae_C368-T01_good_129.340
SRR6049664Rhizomagastrodiae_C368-T10_good_162.200
SRR6049665Rhizomagastrodiae_C368-T10_good_162.200
SRP279888GastroGastrodia elata tuber 2.04
JuvenJuvenile tuber3.43
Mother_GastroMother tuber of Gastrodia elata 1.59
Mother_JuvenMother tuber of Juvenile 0.70