Detail information of GWHGAAEX003276/evm.TU.scaffold_130.145


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672168674|ref|XP_008804345.1|0PREDICTED: protein TIME FOR COFFEE isoform X4 [Phoenix dactylifera]
Swissprottr|Q94KE2|TIC_ARATH2.00E-134Protein TIME FOR COFFEE
trEMBLtr|M0SQQ5|M0SQQ5_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr4P20920_001}
TAIRAT3G223902.00E-66Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000012928086042815343+
Transcript Sequence

Network for GWHGAAEX003276

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms58.540
SRR2545915Juvenile tuber57.910
SRP108465SRR5643513five period of Gastrodia elata67.230
SRR5643514five period of Gastrodia elata59.080
SRR5643515five period of Gastrodia elata76.340
SRR5643524five period of Gastrodia elata61.640
SRR5643525five period of Gastrodia elata113.960
SRR5643528five period of Gastrodia elata73.350
SRR5643658five period of Gastrodia elata112.930
SRR5643659five period of Gastrodia elata87.740
SRR5643660five period of Gastrodia elata86.430
SRR5643661five period of Gastrodia elata102.870
SRR5643662five period of Gastrodia elata102.240
SRR5643663five period of Gastrodia elata92.990
SRR5643664five period of Gastrodia elata152.500
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_179.730
SRR6049655Rhizomagastrodiae_C368-T10_good_1105.300
SRR6049656Rhizomagastrodiae_C368-T07_good_170.350
SRR6049657Rhizomagastrodiae_C368-T07_good_179.260
SRR6049658Rhizomagastrodiae_C368-T04_good_189.620
SRR6049659Rhizomagastrodiae_C368-T04_good_197.830
SRR6049660Rhizomagastrodiae_C368-T01_good_185.480
SRR6049661Rhizomagastrodiae_C368-T04_good_187.680
SRR6049662Rhizomagastrodiae_C368-T01_good_163.950
SRR6049663Rhizomagastrodiae_C368-T01_good_174.030
SRR6049664Rhizomagastrodiae_C368-T10_good_163.320
SRR6049665Rhizomagastrodiae_C368-T10_good_163.320
SRP279888GastroGastrodia elata tuber 74.02
JuvenJuvenile tuber88.60
Mother_GastroMother tuber of Gastrodia elata 134.12
Mother_JuvenMother tuber of Juvenile 222.79