Gene detail

Detail information of GWHGAAEX003281/evm.TU.scaffold_131.7

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG4585	1.00E-17	Predicted transposase
nr	gi\|743798262\|ref\|XP_010925183.1\|	2.36E-25	PREDICTED: uncharacterized protein LOC105047794 [Elaeis guineensis]
trEMBL	tr\|M0SF04\|M0SF04_MUSAM	1.00E-24	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr3P15880_001}
TAIR	AT4G10890	1.00E-17	Unannotated protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000136	292086	346680	+

Transcript Sequence
>GWHTAAEX003281 AGATTATGATCCTGGCTCGAAAAGAGTCCAACAGCCTTTTCAATGTAATTCCTTTTAGGGTTGGGACATATGCAGCCATTTTCTATTTTCTATTATTCTTTGGCATTTATAATCAGTTTCTTCCTTGCCAAATCTGGAAACATTTCAAAACGACGCACGGTGCCCACTGCGCCGATGTGCCTTATATGTTAAATTTTGGGAAGATGGCCAAAAAAAGATGGATAGTAACCTACACGAAGCATATGAAGCAGAAGAGAAAGGTTTATCAAGATGGGGTGCTGGAGCTTTGTGGTTCTATTGGCAAGCATCAAGTTATGTTGTATGATGACAGTGAGAAACTCATAGATAGGAGACATTTGAAGAAGGATGAGATTGTTATATCTGGCGGAACACTGTCCTTTGAAACTCATATTGTGGACATTGGAGATTCTGATGGAAACAACAAGTCTTTAGAAAAGTCAAATGTGAAGTTAGTAATGCGGCCTGAATTACAAAGAGAGAAGGTTACTTTGTCGAATGAAGATGGGGCCATCCTTAGTAGCAAGTACATTAAGTCTGTCGCTTCTGTGGAGATGGGAAAATTTTGTGAATTTCCCAACTTCCTTGTTGAGATTTGTGAAAAACGGGTTTCTGCAACACAACATGATGGCTACTGCAATGTTAGCTCATCATGCAAAGATCTTCACAGAAATGATCTAACGAATCCAATTGCACTTTCTAAACCTGAAAAACGTGGCAAACTTTTGTCCTCTAGGAAAGGCTGCAAAACTCCATTGCACAATTCAAACAGGCATTTTAAGAAAATCTCAGATAATTTTAACGAAAAAATTGGTGGTGCCATGGAACCTACTACCATGCAACTACGTGATGCTCGGCAGATTTTATCAGTCCTTAAAAAGCCGAGTCCTGAAGGGAGGAGCTATGACTCAAGAGATTCGATTGTAGAGCAGGGCTTTACCTCTGAACCGTCAAATAGTTACCCACGTGATTTGCAGGCGTCCTATGAAAGGACTGGGTCATCTTCAATGGATGGCTATGCAAATTCACAAATCAGTTCTATATCAACTGTCGAACCTGTGGTAGATACAAATTGTGAGGGCAGCTTTACTGAAAATGTTCATGCTTCATCTATTTTATCATCTGGAGCTGCCACACTTGGTACTCTGAATATCAACAAAGGCAAGTTGGATTTTAATGAAACTGGTAGCTTGCAAGCAATGGACAGAAGCATATCAAGTGTTTCTGCTTCTGACAAGCTTTGTGTAAATGTCTCAACTGGCGGAAGCTATGAGCCAGTATCTGCAGCTTCAGCTGTTCCTACTGCTTCAGATTGCGCAAAGGATTCTGTGGACACTTTTCCCTCATTTGAACTCGGATTATAAAAAGGCAAAGGGTGAAATCCCAAGATACTTTTGCAGAATGAGCATAGGTTTTTTCTTTCTCCCCTTTTTCATAGGAGAAGGTAAAAATCATAATGCAATTAAAAGGAATTGTTAGAGTGATTCGGATTGACACTTTTTATGCAAGAAATTTACGTCATTATCATAATGCTGGTGCTAGTTTTGTTCTATTTGTCTTCGTTTCAAAGTATGTTTAGGCCTATTTTCTTGTAGCTCTCTAATTTATTATGCTCTACTGAGTCCTTAGTTATAGCCATTTTAGTCCAACCAGATA

Network for GWHGAAEX003281

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF10382.8	DUF2439	70	145	2.30E-13

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	9.010
SRP064423	SRR2545915	Juvenile tuber	13.810
SRP108465	SRR5643513	five period of Gastrodia elata	8.780
	SRR5643514	five period of Gastrodia elata	7.600
	SRR5643515	five period of Gastrodia elata	6.030
	SRR5643524	five period of Gastrodia elata	7.840
	SRR5643525	five period of Gastrodia elata	3.810
	SRR5643528	five period of Gastrodia elata	2.380
	SRR5643658	five period of Gastrodia elata	3.040
	SRR5643659	five period of Gastrodia elata	4.500
	SRR5643660	five period of Gastrodia elata	5.800
	SRR5643661	five period of Gastrodia elata	5.640
	SRR5643662	five period of Gastrodia elata	5.190
	SRR5643663	five period of Gastrodia elata	6.680
	SRR5643664	five period of Gastrodia elata	4.790
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	5.120
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	4.710
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	5.190
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	4.280
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	4.310
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	3.560
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	4.170
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	4.400
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	3.330
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	3.540
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	5.940
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	5.940
SRP279888	Gastro	Gastrodia elata tuber	6.60
	Juven	Juvenile tuber	10.58
	Mother_Gastro	Mother tuber of Gastrodia elata	4.80
	Mother_Juven	Mother tuber of Juvenile	8.84