Detail information of GWHGAAEX003287/evm.TU.scaffold_131.20
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|256823921|ref|YP_003147881.1| | 2.00E-25 | protein kinase family protein with PASTA domain [Kytococcus sedentarius DSM 20547] |
| KOG | KOG0660 | 0 | Mitogen-activated protein kinase |
| nr | gi|672118377|ref|XP_008782395.1| | 0 | PREDICTED: mitogen-activated protein kinase 9-like isoform X1 [Phoenix dactylifera] |
| Swissprot | tr|Q5Z9J0|MPK12_ORYSJ | 0 | Mitogen-activated protein kinase 12 |
| trEMBL | tr|D7SJ91|D7SJ91_VITVI | 0 | Putative uncharacterized protein {ECO:0000313|EMBL:CBI15552.3} |
| TAIR | AT1G73670 | 0 | MAP kinase 15 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000136 | 889134 | 939269 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX003287
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00069.24 | Pkinase | 96 | 387 | 2.50E-68 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | CMGC_MAPK |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K20538 | MPK8 | MAPK signaling pathway - plant | map04016 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0005524 | Molecular Function | ATP binding |
| GO:0004672 | Molecular Function | protein kinase activity |
| GO:0004707 | Molecular Function | MAP kinase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 82.400 |
| SRR2545915 | Juvenile tuber | 60.530 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 43.120 |
| SRR5643514 | five period of Gastrodia elata | 38.790 | |
| SRR5643515 | five period of Gastrodia elata | 35.510 | |
| SRR5643524 | five period of Gastrodia elata | 35.660 | |
| SRR5643525 | five period of Gastrodia elata | 36.410 | |
| SRR5643528 | five period of Gastrodia elata | 35.860 | |
| SRR5643658 | five period of Gastrodia elata | 35.160 | |
| SRR5643659 | five period of Gastrodia elata | 52.060 | |
| SRR5643660 | five period of Gastrodia elata | 51.010 | |
| SRR5643661 | five period of Gastrodia elata | 50.870 | |
| SRR5643662 | five period of Gastrodia elata | 44.880 | |
| SRR5643663 | five period of Gastrodia elata | 46.710 | |
| SRR5643664 | five period of Gastrodia elata | 43.110 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 53.350 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 64.290 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 49.680 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 62.940 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 71.870 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 81.630 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 58.240 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 60.000 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 47.290 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 55.110 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 50.120 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 50.120 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 51.93 |
| Juven | Juvenile tuber | 83.02 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 57.42 | |
| Mother_Juven | Mother tuber of Juvenile | 91.65 |