Detail information of GWHGAAEX003310/evm.TU.scaffold_131.55


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG21418.00E-176Protein involved in high osmolarity signaling pathway
nrgi|743828005|ref|XP_010933742.1|0PREDICTED: nucleolar MIF4G domain-containing protein 1-like isoform X1 [Elaeis guineensis]
trEMBLtr|I1IBP3|I1IBP3_BRADI0Uncharacterized protein {ECO:0000313|EnsemblPlants:BRADI3G49040.1}
TAIRAT5G179308.00E-176MIF4G domain-containing protein / MA3 domain-containing protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000013625885482601065+
Transcript Sequence

Network for GWHGAAEX003310

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02854.18MIF4G61176.70E-12
PF02847.16MA32053062.70E-21
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding
GO:0003723Molecular FunctionRNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms59.940
SRR2545915Juvenile tuber43.550
SRP108465SRR5643513five period of Gastrodia elata15.800
SRR5643514five period of Gastrodia elata13.990
SRR5643515five period of Gastrodia elata13.410
SRR5643524five period of Gastrodia elata15.180
SRR5643525five period of Gastrodia elata13.580
SRR5643528five period of Gastrodia elata10.760
SRR5643658five period of Gastrodia elata12.770
SRR5643659five period of Gastrodia elata14.860
SRR5643660five period of Gastrodia elata18.280
SRR5643661five period of Gastrodia elata13.040
SRR5643662five period of Gastrodia elata15.780
SRR5643663five period of Gastrodia elata16.200
SRR5643664five period of Gastrodia elata17.320
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_123.500
SRR6049655Rhizomagastrodiae_C368-T10_good_122.420
SRR6049656Rhizomagastrodiae_C368-T07_good_121.100
SRR6049657Rhizomagastrodiae_C368-T07_good_130.600
SRR6049658Rhizomagastrodiae_C368-T04_good_129.570
SRR6049659Rhizomagastrodiae_C368-T04_good_130.990
SRR6049660Rhizomagastrodiae_C368-T01_good_124.950
SRR6049661Rhizomagastrodiae_C368-T04_good_131.320
SRR6049662Rhizomagastrodiae_C368-T01_good_120.780
SRR6049663Rhizomagastrodiae_C368-T01_good_123.800
SRR6049664Rhizomagastrodiae_C368-T10_good_118.320
SRR6049665Rhizomagastrodiae_C368-T10_good_118.320
SRP279888GastroGastrodia elata tuber 18.44
JuvenJuvenile tuber20.86
Mother_GastroMother tuber of Gastrodia elata 20.52
Mother_JuvenMother tuber of Juvenile 15.88