Gene detail

Detail information of GWHGAAEX003314/evm.TU.scaffold_132.5

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|222639881\|gb\|EEE68013.1\|	5.87E-41	hypothetical protein OsJ_25976 [Oryza sativa Japonica Group]
Swissprot	tr\|P80728\|MAVI_CUCPE	4.00E-22	Mavicyanin
trEMBL	tr\|B9FYZ6\|B9FYZ6_ORYSJ	2.00E-41	Putative uncharacterized protein {ECO:0000313\|EMBL:EEE68013.1}
TAIR	AT2G32300	5.00E-30	uclacyanin 1

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000127	292276	293899	+

Transcript Sequence
>GWHTAAEX003314 CAGCGTTTGCATTAGAAGTCTTGTCAAAGCCGTGGAGACGAAGTCCTCATTTCTGATTTTTTGCTAACCGCGTCTCGTAATAGTTAAAGCACAAACTCGGGAAATTTCATCGCTCATATCAATTATAATACTGTGCATTCTGTCTATATATAGCGAACACGCACTTCAATCCTGCCAGCCAAGCAACTGTTCAACAGCTAATCTCTCAATCTGTTTCGTCCCCTTTCTCTCTTCATCTCAGGCGCAGCACGTCTTCAATAATCAGCAGGTTGATGGAGTGGTCTCCGGCCAAAGTGCTTATCTTAATTGCGGCCGTTTCCGGCATTATTGAGCTAACGGCAGCTGCCAATCACTCCGTCGGATCTCCCGGTCAGTGGGATCTCAGAACCAACCTTTCTCAATGGGCTGCAAGCACTAACTTCCGCGCCGGAGACAATCTCATTTTTACTTACGACAGGACGAGCCACAACGTGTTGGAGGTGAACCGGTCCAGCTATGACAACTGCCTCTCAAGCGGACCAATCCAGACCCACAGCTCCGGCAACGACGTCATCGCTCTGCCACAGAAAGGCACCCGCTACTTCATCTGCGGATTCCCGACGCACTGCACTCTCGGCATGAAAATTCAGGTCGTCACCAACGCGGCTGCCGCGCCCTCCCCGGCCTCGCCGCCAAACTCTCCCCCGCCGTCCAGCGGCTCGACCCCGGCGCCTCCCCCATCTGGCGGCTCGACCCCGGCGCCTCCCCCATCTGGCGGCTCGACCCCGGCGCCGCCCACTTCCGGCGGAACTACCCCGGCGCCGCCCACTTCCGGCGGCTCGTCTCTTCCGCCTGAAAGCGGAACCTCAGCAGGCGGGCCCACCCCCTCGCCCTCAGCTGCCGGAAGGAGGATGCTGGATGGTAAAGCGGCTGCTGCCGGGATCACCATAGCTGTTGGGATGACCGCTATGCTGTTGGCGTTTTAAGGTGGATGAATCCGCTGCATCATATTTACATGTAGAACTATATTGATTGAACAGTATTTTGTTCTGTTAGATTATTTTATGATTTGAGCTGTAGATGTATGTGCACTCTTTCGTTGTGTTTTCTTTTCTTTTATATTTAATAATATGACTTCGAGCAGCCTGCCTTGGTTTTGCATTTTTTATTTTTGTTGTTGTATCTTTGCGTAGTAGATAACTTTTATGCATTTGTTAAACCTTAATATCTCAAGTCAAGAGCAATGCCCATCAAAAGAGTATTCATGAGAAAGAACTTTTGGGATCAAGAACTTAACACCAGCATAAACCATAATCAACAAGGTCCATTAGAGCAAGATGATCTTTATGAATGGTTAGAATGCATATCTTGATCTACAATCACGATCTTTCGAGCAATTCCAGAAGATCAAATTCTTCCCATAACCCCCTTTGACCCGCCTCTTGATTGAGATGGATGAGTCCCACTTTAACGAACCTATGGAGAGTTACTTAAGCAGAGAAG

Network for GWHGAAEX003314

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module4

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF02298.16	Cu_bind_like	37	116	1.40E-25

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0009055	Molecular Function	electron carrier activity

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	147.830
SRP064423	SRR2545915	Juvenile tuber	106.700
SRP108465	SRR5643513	five period of Gastrodia elata	244.590
	SRR5643514	five period of Gastrodia elata	95.400
	SRR5643515	five period of Gastrodia elata	751.680
	SRR5643524	five period of Gastrodia elata	268.700
	SRR5643525	five period of Gastrodia elata	687.750
	SRR5643528	five period of Gastrodia elata	984.960
	SRR5643658	five period of Gastrodia elata	242.950
	SRR5643659	five period of Gastrodia elata	203.920
	SRR5643660	five period of Gastrodia elata	67.020
	SRR5643661	five period of Gastrodia elata	180.660
	SRR5643662	five period of Gastrodia elata	334.510
	SRR5643663	five period of Gastrodia elata	133.300
	SRR5643664	five period of Gastrodia elata	566.430
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	444.850
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	366.750
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	260.980
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	273.460
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	283.050
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	392.230
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	620.860
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	306.880
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	286.610
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	768.000
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	285.920
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	285.920
SRP279888	Gastro	Gastrodia elata tuber	128.62
	Juven	Juvenile tuber	17.70
	Mother_Gastro	Mother tuber of Gastrodia elata	3,367.08
	Mother_Juven	Mother tuber of Juvenile	3,141.57