Detail information of GWHGAAEX003320/evm.TU.scaffold_132.21


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743801515|ref|XP_010926369.1|6.79E-94PREDICTED: zinc finger CCCH domain-containing protein 62-like [Elaeis guineensis]
Swissprottr|Q338N2|C3H62_ORYSJ5.00E-55Zinc finger CCCH domain-containing protein 62
trEMBLtr|M0RJK5|M0RJK5_MUSAM2.00E-92Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr10P19300_001}
TAIRAT5G668403.00E-77SAP domain-containing protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000012713055071329530-
Transcript Sequence

Network for GWHGAAEX003320

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms55.760
SRR2545915Juvenile tuber56.560
SRP108465SRR5643513five period of Gastrodia elata25.640
SRR5643514five period of Gastrodia elata27.980
SRR5643515five period of Gastrodia elata23.270
SRR5643524five period of Gastrodia elata30.170
SRR5643525five period of Gastrodia elata32.150
SRR5643528five period of Gastrodia elata32.980
SRR5643658five period of Gastrodia elata39.620
SRR5643659five period of Gastrodia elata21.690
SRR5643660five period of Gastrodia elata20.010
SRR5643661five period of Gastrodia elata21.330
SRR5643662five period of Gastrodia elata22.270
SRR5643663five period of Gastrodia elata25.120
SRR5643664five period of Gastrodia elata24.820
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_139.120
SRR6049655Rhizomagastrodiae_C368-T10_good_130.180
SRR6049656Rhizomagastrodiae_C368-T07_good_136.870
SRR6049657Rhizomagastrodiae_C368-T07_good_134.460
SRR6049658Rhizomagastrodiae_C368-T04_good_151.610
SRR6049659Rhizomagastrodiae_C368-T04_good_156.890
SRR6049660Rhizomagastrodiae_C368-T01_good_145.500
SRR6049661Rhizomagastrodiae_C368-T04_good_144.760
SRR6049662Rhizomagastrodiae_C368-T01_good_133.200
SRR6049663Rhizomagastrodiae_C368-T01_good_136.310
SRR6049664Rhizomagastrodiae_C368-T10_good_131.510
SRR6049665Rhizomagastrodiae_C368-T10_good_131.510
SRP279888GastroGastrodia elata tuber 41.59
JuvenJuvenile tuber42.76
Mother_GastroMother tuber of Gastrodia elata 40.91
Mother_JuvenMother tuber of Juvenile 46.77