Detail information of GWHGAAEX003327/evm.TU.scaffold_133.5


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|194335955|ref|YP_002017749.1|1.00E-65NAD-dependent epimerase/dehydratase [Pelodictyon phaeoclathratiforme BU-1]
KOGKOG15027.00E-172Flavonol reductase/cinnamoyl-CoA reductase
nrgi|685375708|ref|XP_009120886.1|3.39E-170PREDICTED: cinnamoyl-CoA reductase 1 isoform X1 [Brassica rapa]
Swissprottr|Q500U8|TKPR1_ARATH1.00E-89Tetraketide alpha-pyrone reductase 1
trEMBLtr|M4CDF5|M4CDF5_BRARP1.00E-170Uncharacterized protein {ECO:0000313|EnsemblPlants:Bra002236.1-P}
TAIRAT5G194407.00E-172NAD(P)-binding Rossmann-fold superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000142226949315824+
Transcript Sequence

Network for GWHGAAEX003327

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01370.20Epimerase82451.70E-23
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0050662Molecular Functioncoenzyme binding
GO:0003824Molecular Functioncatalytic activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms42.230
SRR2545915Juvenile tuber47.570
SRP108465SRR5643513five period of Gastrodia elata75.070
SRR5643514five period of Gastrodia elata129.410
SRR5643515five period of Gastrodia elata88.300
SRR5643524five period of Gastrodia elata144.670
SRR5643525five period of Gastrodia elata51.830
SRR5643528five period of Gastrodia elata65.680
SRR5643658five period of Gastrodia elata52.370
SRR5643659five period of Gastrodia elata49.100
SRR5643660five period of Gastrodia elata58.000
SRR5643661five period of Gastrodia elata39.750
SRR5643662five period of Gastrodia elata46.210
SRR5643663five period of Gastrodia elata43.700
SRR5643664five period of Gastrodia elata45.440
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_176.140
SRR6049655Rhizomagastrodiae_C368-T10_good_179.370
SRR6049656Rhizomagastrodiae_C368-T07_good_187.670
SRR6049657Rhizomagastrodiae_C368-T07_good_169.450
SRR6049658Rhizomagastrodiae_C368-T04_good_193.320
SRR6049659Rhizomagastrodiae_C368-T04_good_191.950
SRR6049660Rhizomagastrodiae_C368-T01_good_1105.620
SRR6049661Rhizomagastrodiae_C368-T04_good_178.980
SRR6049662Rhizomagastrodiae_C368-T01_good_1109.000
SRR6049663Rhizomagastrodiae_C368-T01_good_1133.640
SRR6049664Rhizomagastrodiae_C368-T10_good_1109.890
SRR6049665Rhizomagastrodiae_C368-T10_good_1109.890
SRP279888GastroGastrodia elata tuber 51.30
JuvenJuvenile tuber142.59
Mother_GastroMother tuber of Gastrodia elata 26.99
Mother_JuvenMother tuber of Juvenile 61.83